| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24400 |
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| Symbol | |
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| ID | 8387764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2630105 |
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| End bp | 2631883 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976480 |
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| Product | DNA/RNA helicase, superfamily II |
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| Protein accession | YP_003134261 |
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| Protein GI | 257056429 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.21286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGAGA CGACCAAGGT CCGGGACGGC GGTGCCACGT CCGCCCCCGA GCCCGCGCAC
GACGCGACAG CCCGCCCCCT GCGTGCGTGG CAGCGTCGCG CGCTGACCAA GTACCTCACG
CGCAAGCCCA AGGATTTCCT CGCGGTGGCG ACGCCCGGGG CGGGTAAGAC GGTGTTCGGG
CTGCGGGTGG CCGCCGAACT GCTCTCCGAC CGCACCGTCG AGGCGGTCAC CATCGTCACT
CCCACCGAAC ATCTCAAACA CCAGTGGGCG GAATCGGCGG AGCGCGCCGG TATCGCCATC
GACTCGAACT TCCGTAACTC CGACGGGGTC ACGTCCCCGG ACTACCAGGG TGTCGCGGTC
ACCTATGCCC AGGTCGCCGC TCATCCGAGC CTGCACAGGG TGCGTACCGA GAACCGCAAG
ACCCTCGTCA TCCTGGACGA GATCCACCAC GCCGGCGATT CCAAGTCGTG GGGCGATGCC
ATCTACGAGG CGTTCACGCC CGCCGTCCGC CGGTTGGCGC TGACCGGTAC GCCGTTCCGC
AGCGACGATT CGCCGATCCC GTTCGTCACC TACGAACCGG ACGCCGACGG CGCGCTGCGC
AGCAAACCCG ACCATTCCTA CAACTACGCG GACGCGCTCG CCGACGGTGT CGTGCGTCCC
GTGGTGTTCC TGGCCTATTC GGGTGAGGCC TCGTGGCGCA CGAGTGCCGG CGACGAGTTC
ACCGCGCGGC TCGGTGAACC GCTCACCGCC GAGCAGAACG CCAGGGCCTG GCGTACCGCC
CTCGACCCCA GTGGGGAGTG GATCCCCGCG GTGTTCGAGG CGGCCGACAC GCGGTTGACG
CAGTTGCGGA CCAGCGGAAT GCCCGACGCG GGTGGCCTGG TCATCGCCAC CGACCAGGAG
TCGGCCCGTG CGTACGCGAA GATCCTGGCC AGGATCGCGG GGGAGCAACC CGTCGTGGTG
CTCTCGGACG ATCCGAGGGC GACCAAACGC ATCGCGGAGT TCTCCGAGTC CGAGCAACGC
TGGCTGGTGG CGGTCCGCAT GGTCTCCGAG GGCGTCGACG TGCCCAGGCT GGCCGTCGGG
GTGTATGCCA CCAGCGCGTC GACCCCGCTG TTCTTCGCGC AGGCCATCGG CCGCTTCGTG
CGGTCACGTC GTCCGGGGGA GACGGCGAGT GTGTTCCTGC CGAGTGTGCC GGTGTTGTTG
GAGCTGGCCA GTGAGCTGGA GGCCGAGCGT GACCATGTGC TCGGCAAGCC GCACCGCGAG
AAGAGCGGCT GGGACGACGA ACTGATCGTC GCGGCCAACC GCACCGACAA CGAGCGTGGC
GAGGAGGAGA AGTCGTTCAC CTCGCTCGGC GCGTCGGCGG AGCTCGACCA GGTGATCTAC
GACGGCAACT CGTTCGGCAC GCCCGTGTTG GCGGGCAGCG AGGAGGAACA GGAGTACCTC
GGCCTACCCG GATTGCTGGA TGCCGATCAG GTACGGATGC TGCTGCGCAA GCGGCAGGAG
GAGCAGCTCG CCAAGGCCAA GCGGAACAAG GCCAAGGAAA CCGAGGGGAC CAAGGCCGAG
AAACCGCCCG CGCCCACGCC ACGCCCGGCC TCGGTGAACG AACGGCTCAA GGCGCTGCGT
AAGGAATTGA ACACGCTGGT CGGGCTCTAC CACCACCGCA CGCGCAAACC GCACGGGGTG
ATCCACAACG AGTTGCGTCG GATCTGCGGT GGACCGCCGA CGGCGATGGC CACCGTGGAG
CAACTCGAGG AGCGCATCGC CACTCTCCGG TCCTGGTAG
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| Protein sequence | MSETTKVRDG GATSAPEPAH DATARPLRAW QRRALTKYLT RKPKDFLAVA TPGAGKTVFG
LRVAAELLSD RTVEAVTIVT PTEHLKHQWA ESAERAGIAI DSNFRNSDGV TSPDYQGVAV
TYAQVAAHPS LHRVRTENRK TLVILDEIHH AGDSKSWGDA IYEAFTPAVR RLALTGTPFR
SDDSPIPFVT YEPDADGALR SKPDHSYNYA DALADGVVRP VVFLAYSGEA SWRTSAGDEF
TARLGEPLTA EQNARAWRTA LDPSGEWIPA VFEAADTRLT QLRTSGMPDA GGLVIATDQE
SARAYAKILA RIAGEQPVVV LSDDPRATKR IAEFSESEQR WLVAVRMVSE GVDVPRLAVG
VYATSASTPL FFAQAIGRFV RSRRPGETAS VFLPSVPVLL ELASELEAER DHVLGKPHRE
KSGWDDELIV AANRTDNERG EEEKSFTSLG ASAELDQVIY DGNSFGTPVL AGSEEEQEYL
GLPGLLDADQ VRMLLRKRQE EQLAKAKRNK AKETEGTKAE KPPAPTPRPA SVNERLKALR
KELNTLVGLY HHRTRKPHGV IHNELRRICG GPPTAMATVE QLEERIATLR SW
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