| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24370 |
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| Symbol | |
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| ID | 8387761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2626543 |
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| End bp | 2627961 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976477 |
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| Product | ABC-type xylose transport system, permease component |
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| Protein accession | YP_003134258 |
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| Protein GI | 257056426 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.132635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.131719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA CCTCTACCTC GCCGCAGAGT GCGGCGATCT CCGACTTCGG GATCGACACC
ACCGCGATGT CGACGTCCGA GGTCGTGCGT GACTATTTCG CGCGGCTGCG CGCCGGCCAG
CTCGGTTCGT TGCCGGCGCT GCTCGGGCTC GTGGTACTCG TGGCGGTGTT CGCCACCCTG
TCGGACGTCT TCCTGTCATT GAACAACCTC GCCAACCTGC TCGCGCAGGG AGCGGGACAG
ACCATCATCG CGATGGGCAT CGTCTTCGTG CTGCTGGTCG GCGAGATCGA CCTGTCGGCG
GGCACCGCCT CCGGTGTCAC CGCAGCGGTA CTCGCGATGC ACTTCGTCGA GGACGGCAAC
CTGCTCGGGG GCATGGGCTC GACCGTGTTC ATCCTGTTCA ACGCCGTGCT CGCCCTCGCC
GCGGTCCTCG CGATGCTGTT ACGCATCTGG GCGGGTGCGG TGATCTCGGT GCTCGGCATC
GGCCTCACCG TGTCCGGATT GCCCGCCAAC CCGTGGGTGG AGATGTTGCT CGCGCTGTGC
GTGGGGACCG CGATCGGGTG CATCACCGGA TTTCTGGTGG CCCGGATCGG GATGCCGTCG
TTCGTGGTGA CGCTCGCGCT GTTCCTCACG TGGCAGGGGG TGATCCTCCA GTTCATCGGT
GAGGGCGGCG TGCTCGGTAT CTCCACCTCG CCGGTGCTGA ACGCGGTCGC GAACGGCAAC
CTGTCCGTGT TCGGCAGTTG GTTGCTCTGT CTCATCGCCG TCGGTGGATT CGCCACCGTC
GTACTGGGTC GGCACATCCG ACGGCTACGG CGCGGTCTGG TGACCCAGCC GACCACCATC
GTCGCGCTCA AGGTGGGTGG CGTCGCCGTC CTCGGCGTGG TGGCGACCGC TCTGTTGACG
GTCGATCGGT CGCCGAACCC GACCATCGAG ATCCGCGGTG TTCCGTATGT GGTGCCGATC
GTGCTGGCGT TGCTCGCTCT CGGGACCTAC GTGCTCAACC GCACGCGTTA CGGCAGGCAC
ATCTATGCCG TCGGTGGGAA CCGGGAAGCC GCGCGCAGGG CGGGCATCGA CGTCACGCGC
ATCAGGGCGA GTGTGTTCGT CGTGTGTTCC TCGGTGGCCG CGCTCGGCGC GATCGTGTAC
TCGTCGAAGG TCGGTTCGGT CGACCCGCAG GCGGGCGGAC TCAACACGCT GTTGTTCGCC
GTGGGCGCCG CCGTGATCGG CGGTACGTCC TTGTTCGGCG GCAAGGGTCG GGTGTCCGAC
GCCGTCATCG GCGGCACCGT ACTCGCCGTG GTGTCCAACG GTCTCGGGCT GCTCAAGCAA
CCCGCGGCGG TCGTGTCGAT CATCACGGGG CTCGTCCTGC TGCTCGCCGC CACCGTGGAC
GCGGTGTCAC GCAAGCGCGC GGCCGGCGCG GCCCGCTGA
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| Protein sequence | MTQTSTSPQS AAISDFGIDT TAMSTSEVVR DYFARLRAGQ LGSLPALLGL VVLVAVFATL
SDVFLSLNNL ANLLAQGAGQ TIIAMGIVFV LLVGEIDLSA GTASGVTAAV LAMHFVEDGN
LLGGMGSTVF ILFNAVLALA AVLAMLLRIW AGAVISVLGI GLTVSGLPAN PWVEMLLALC
VGTAIGCITG FLVARIGMPS FVVTLALFLT WQGVILQFIG EGGVLGISTS PVLNAVANGN
LSVFGSWLLC LIAVGGFATV VLGRHIRRLR RGLVTQPTTI VALKVGGVAV LGVVATALLT
VDRSPNPTIE IRGVPYVVPI VLALLALGTY VLNRTRYGRH IYAVGGNREA ARRAGIDVTR
IRASVFVVCS SVAALGAIVY SSKVGSVDPQ AGGLNTLLFA VGAAVIGGTS LFGGKGRVSD
AVIGGTVLAV VSNGLGLLKQ PAAVVSIITG LVLLLAATVD AVSRKRAAGA AR
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