Gene Svir_24270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24270 
Symbol 
ID8387751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2618422 
End bp2618937 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID644976468 
Producthypothetical protein 
Protein accessionYP_003134249 
Protein GI257056417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0985474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA ACGCGCACAC GCGGACAAAA GCTGATCTTC GGTACTCCGA ACGGCTGTTC 
GTACCGTTGT GGCACTGGCC GGCACCGCTG ATAGCGGCGG CGCTTTTGGC GTTTCAGATC
CACTACGGCT ACCCGTCCCT GCCGATGTGG CTGCCGTACG CCGTGTTGCT CCCACTGGCC
GTGGCGGTGA CCCTCGCCCT CGGCCGTACG CGGATCGCGG TGGTCGAGGA CGACGAGCCC
CGGCTGTGGG TCGGCCAGGC GAACCTGCCG CTGCGTTACA TCGCGGCGGT CGAGATCGTG
CCACACGAGA GCAAACGTCA GGCTTTGGGA CCGGAGTTCG ACCCTGCGGC GTTCTGCGTG
CACAAGCCGT GGATTCGCTC GATGGTTCGC GTGCATCTCG ACGACCCCGA GGACCCCACC
CCGTACTGGA TCTTCAGTAC CCGCCGCCCG GAACGCGTGG CGGCTCTGCT CTCGGACACC
CACGAGCATG CGGACAACGG GGATCACCGA GGCTGA
 
Protein sequence
MTDNAHTRTK ADLRYSERLF VPLWHWPAPL IAAALLAFQI HYGYPSLPMW LPYAVLLPLA 
VAVTLALGRT RIAVVEDDEP RLWVGQANLP LRYIAAVEIV PHESKRQALG PEFDPAAFCV
HKPWIRSMVR VHLDDPEDPT PYWIFSTRRP ERVAALLSDT HEHADNGDHR G