Gene Svir_24250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24250 
Symbol 
ID8387749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2617209 
End bp2617931 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID644976466 
Producthypothetical protein 
Protein accessionYP_003134247 
Protein GI257056415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0996351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGATTT TCAGGCGACG CAAACGGAAG AAGAAAGCGG TTGTCGACGA CGTCGAGGAG 
ATCGACCGCG ACGTGGACAT CGCCGATGAC GACGGCGATG CCAGTGACTA CGACGACCAC
GACGACGCCG AGGAGACCGA CGACGGTCCG GCCTCCGGTC CTTACGACAT CTCCGAGGCA
CCCGATGACG GCATCCCGAG GATGGACTTG GGGTCGGTCA AGGTCCCGGT GCCGAACGGT
GCGCAGGTTC AGGTGGAGAT GGACCAGGCG AGGGGCACGG TGCGTGCCGT CCACGTCGTG
ACCCCACAGG GACAGGTCAC GGTGAGTGCC TACGCCGCTC CACGGTCCGG TGGGTTGTGG
AGCGAAGTGA GCGGTGAACT CGCCGAGCAA CTGCGTTCCG ACGGCGCCCG AGTGTCCCTC
GGCCGTGGTG AATGGGGCAT GGAGCTGTCC GCCATCGTCG GCGAGGTCGC CCTGCGGTTC
ATCGGAGTGG ACGGGCCACG GTGGCTGCTG CGAGGCGTCA TCGCCGGGCC CCAGTCGGAG
GCGGCCCGGG CGCCCGAGGT GCTGCGCGAG ATCCTGCGAG GCACGATCGT CGACCGCGGA
CACGCCCCCA TGCCGGTACG TACGCCGCTT CAGATCACCC TGCCCGAGGC GATCGCCTCC
CACATCAAAA GCAGGCAGCA GCAGGCACAG CAAGTGGCTC AGCAGCAAGC CCAACAGCAG
TAG
 
Protein sequence
MGIFRRRKRK KKAVVDDVEE IDRDVDIADD DGDASDYDDH DDAEETDDGP ASGPYDISEA 
PDDGIPRMDL GSVKVPVPNG AQVQVEMDQA RGTVRAVHVV TPQGQVTVSA YAAPRSGGLW
SEVSGELAEQ LRSDGARVSL GRGEWGMELS AIVGEVALRF IGVDGPRWLL RGVIAGPQSE
AARAPEVLRE ILRGTIVDRG HAPMPVRTPL QITLPEAIAS HIKSRQQQAQ QVAQQQAQQQ