Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_24250 |
Symbol | |
ID | 8387749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2617209 |
End bp | 2617931 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976466 |
Product | hypothetical protein |
Protein accession | YP_003134247 |
Protein GI | 257056415 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0996351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGGATTT TCAGGCGACG CAAACGGAAG AAGAAAGCGG TTGTCGACGA CGTCGAGGAG ATCGACCGCG ACGTGGACAT CGCCGATGAC GACGGCGATG CCAGTGACTA CGACGACCAC GACGACGCCG AGGAGACCGA CGACGGTCCG GCCTCCGGTC CTTACGACAT CTCCGAGGCA CCCGATGACG GCATCCCGAG GATGGACTTG GGGTCGGTCA AGGTCCCGGT GCCGAACGGT GCGCAGGTTC AGGTGGAGAT GGACCAGGCG AGGGGCACGG TGCGTGCCGT CCACGTCGTG ACCCCACAGG GACAGGTCAC GGTGAGTGCC TACGCCGCTC CACGGTCCGG TGGGTTGTGG AGCGAAGTGA GCGGTGAACT CGCCGAGCAA CTGCGTTCCG ACGGCGCCCG AGTGTCCCTC GGCCGTGGTG AATGGGGCAT GGAGCTGTCC GCCATCGTCG GCGAGGTCGC CCTGCGGTTC ATCGGAGTGG ACGGGCCACG GTGGCTGCTG CGAGGCGTCA TCGCCGGGCC CCAGTCGGAG GCGGCCCGGG CGCCCGAGGT GCTGCGCGAG ATCCTGCGAG GCACGATCGT CGACCGCGGA CACGCCCCCA TGCCGGTACG TACGCCGCTT CAGATCACCC TGCCCGAGGC GATCGCCTCC CACATCAAAA GCAGGCAGCA GCAGGCACAG CAAGTGGCTC AGCAGCAAGC CCAACAGCAG TAG
|
Protein sequence | MGIFRRRKRK KKAVVDDVEE IDRDVDIADD DGDASDYDDH DDAEETDDGP ASGPYDISEA PDDGIPRMDL GSVKVPVPNG AQVQVEMDQA RGTVRAVHVV TPQGQVTVSA YAAPRSGGLW SEVSGELAEQ LRSDGARVSL GRGEWGMELS AIVGEVALRF IGVDGPRWLL RGVIAGPQSE AARAPEVLRE ILRGTIVDRG HAPMPVRTPL QITLPEAIAS HIKSRQQQAQ QVAQQQAQQQ
|
| |