| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24210 |
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| Symbol | |
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| ID | 8387745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2611463 |
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| End bp | 2613667 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976462 |
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| Product | predicted RND superfamily drug exporter |
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| Protein accession | YP_003134243 |
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| Protein GI | 257056411 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0859082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0577993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGT GGCTATACCG GCTCGGCCGT TTCGCCTTCC GGCGGCGCGG ACTGGTAGCT
CTACTGTGGA TCGTAGTGCT GGCCGCGGTG GGTGGCGCCA CACTGAGCAC CTCCTCCACC
GCCTCCACCT CGATCTCCAT CCCCGGGACT GAGGCCCAGC AGGCGGCCGA ACTGATGGAG
GAACGCTTCC CCGGCAGCAA GACCGACGGA GCCACCGCGC GGGTGGTCCT CCAAGCACCG
GACGGCGAGC AGATCACCGC TCCGGAATAC CAGGCGGCCA TCGGCGACGT CGCCGCGGAA
CTCGCCCAGG GCAAGCAGGT CCAACAGGTC ATCGACCCGT TCCAGGGGCA GACCGTCAGC
CCGGACCAGA CCATCGCCTA CATCCAGGTC AACTACGACG CGAGTCCCCT CGACCTGACC
GACGAGACAC GTGCCGCTCT CGAGGACGCC GCCGAGTCGG CCCGAGAGGC CGGCCTGGTC
GCGGAGATCG GCGGTGACGC GCTGTTCACG ATGCCGGAGA CCGGTATCAC CGAGGTGATC
GGTGTCATCG TCGCCGCGGT GGTGCTGCTG ATCACCTTCG GTTCGCTCGT CGCGGCCGGT
CTGCCGCTGA TCACCGCGTT GATCGGCGTC GGCATCAGCG TCGGCATCAT CACCGTCCTC
ACCGGTGTTC TGGAGCTCGA CAGCACCACT CCGATCCTGG CCACGATGAT CGGCCTGGCG
GTCGGGATCG ACTACGCGTT GTTCATCGTG TCCCGGTACC GCGCCGAACT CGCCGAAGGA
CACGAGCCAC TCGACGCCGT CGGCCGGGCG ACGGGAACCG CCGGATCCGC CGTGGTCTTC
GCCGGTCTCA CCGTCATCAT CGCCTTGGCC TGCCTGTTCG TGGTCAACAT CCCGATCCTG
ACGAAGATGG GTCTGGCCGC CGCGGGTGCC GTGGTCTTCG CCGTCCTCGT CGCACTGACC
CTGATCCCCG CACTGATCGG CTTCGCCGGG AAGCGACTGC TGCCGCGCAA GCAGCGTAAC
GGCGACGCTC AGGACGCCGA GCAGAAACCG CGTGCGGGCA CCCGATGGGC TCGGTTCGTG
CTCCGACACC GACTCCCGGT GCTGGTGGTC AGCATCGCAG CCCTCGGTGT GATCGCCATA
CCCGCGACGG ACCTGCAGTT GGGCCTGCCC GACGACGGCG CCAAATCCAC CGACAGCACC
CAACGTCGCG CCTACGACCT GATCGCCCAG GGCTTCGGCC CCGGCACCAA CGGCCCGCTG
ATCGTGCTCG TCGACGCGCA GAACAGCGAT GACCCCCAGG CCGCGGCCGA CGCGACCGCA
CGTGCACTCC AGGGGTTGGA CAACGTCGCC ATCGCCATGC CTGCCACTTT CAACCCGGCG
GGCGACACGG CGATGCTGAC CGTCATCCCG GCTTCCGCCC CCAGCAGCGC CGAGACCGAG
ACGCTCGTAC ACGACATCCG GGCCGAAGCC GGCGACATCG CCGACGCCAC CGGGGCGAAC
GTCCTCGTCA CCGGTCAGAC CGCGATGGGC ATCGACGTCT CCCAGAAGCT GGACGACGCC
CTGATGCCCT ATCTGCTGCT GGTCGTCGGC CTGGCCTTCG TCCTGCTGAT GGTGGTCTTC
CGCTCGATCC TCGTCCCGCT CAAGGCCGCG CTCGGCTTCC TGTTGTCGGT CATCGGCGCG
CTCGGCGCCG TGGTGGCGGT CTTCCAGTGG GGCTGGCTGG CCGACCTCTT CGGTGTGGAA
CAGACCGGTC CGGTCATGAG CCTCATGCCG ATCATCCTGG TCGGTCTGGT GTTCGGCCTG
GCCATGGACT ACGAGGTCTT CCTCGTCACC CGGATGCGGG AGGCCTACGT CCACGGCGAG
AGCGCTCACG AGGCGATCGT CACGGGCTTC AAGCACGGGG CCCGGGTGGT CACCGCCGCC
GCACTGATCA TGATCAGTGT CTTCGCGGGC TTCATCGGCT CGGACGAGTC GATGATCAAG
ATGATCGGTT TCGGACTGGC GATCGCCGTT CTGTTCGACG CGTTCGTGGT GCGGATGACG
ATCGTCCCCG CCGTGCTCGC CCTGCTCGGC AAGGCGGCCT GGTGGTTCCC CCGCCCGTTG
GACAAGTTCC TGCCGAACGT CGATGTCGAG GGCGAGCGGC TTCGCCACAA GCTCGACGAC
ACCGAGCCGG CGAAGAAGCC AGAAGCTGCC GCTCACGGCT CCTGA
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| Protein sequence | MATWLYRLGR FAFRRRGLVA LLWIVVLAAV GGATLSTSST ASTSISIPGT EAQQAAELME
ERFPGSKTDG ATARVVLQAP DGEQITAPEY QAAIGDVAAE LAQGKQVQQV IDPFQGQTVS
PDQTIAYIQV NYDASPLDLT DETRAALEDA AESAREAGLV AEIGGDALFT MPETGITEVI
GVIVAAVVLL ITFGSLVAAG LPLITALIGV GISVGIITVL TGVLELDSTT PILATMIGLA
VGIDYALFIV SRYRAELAEG HEPLDAVGRA TGTAGSAVVF AGLTVIIALA CLFVVNIPIL
TKMGLAAAGA VVFAVLVALT LIPALIGFAG KRLLPRKQRN GDAQDAEQKP RAGTRWARFV
LRHRLPVLVV SIAALGVIAI PATDLQLGLP DDGAKSTDST QRRAYDLIAQ GFGPGTNGPL
IVLVDAQNSD DPQAAADATA RALQGLDNVA IAMPATFNPA GDTAMLTVIP ASAPSSAETE
TLVHDIRAEA GDIADATGAN VLVTGQTAMG IDVSQKLDDA LMPYLLLVVG LAFVLLMVVF
RSILVPLKAA LGFLLSVIGA LGAVVAVFQW GWLADLFGVE QTGPVMSLMP IILVGLVFGL
AMDYEVFLVT RMREAYVHGE SAHEAIVTGF KHGARVVTAA ALIMISVFAG FIGSDESMIK
MIGFGLAIAV LFDAFVVRMT IVPAVLALLG KAAWWFPRPL DKFLPNVDVE GERLRHKLDD
TEPAKKPEAA AHGS
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