Gene Svir_24100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24100 
Symbol 
ID8387734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp2599614 
End bp2600180 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content70% 
IMG OID644976453 
Producthypothetical protein 
Protein accessionYP_003134234 
Protein GI257056402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0403193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0325887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCT CGATGACCCA GGCGCCCGAG GAGTTCCGTG CTGCTGTCGC CGCGTTGCGT 
TCCGTCACAC CGCGGCCCGA GGTGACATTG GAACCGATCA AGGCTCCCCA GCGTCTGGCG 
CCGTGGACAT TCGCTCTCGC GGCCGAGACC ACAGGCCCCG ACGACATCCC CGCCACGGGA 
CGGCTCGTGC TGTTGCACGA CCCGAGCGGC CAGGACGGCT GGAACGGCGT GTTCCGCCTC 
GTCGTCTACA TGCGGGCCGA GTTGGACGCC GAACTCGCCA CCGACCCGTT CCTGCCGGCC 
GTGGGCTGGT CCTGGCTCAC CGACGCCCTC GACACCGCGG GAGCGTCGTG GACAGCGCTC 
GGCGGCACGG TCACCGAGAC CTCCTCGGCC CGGTTCGGTG ACATCTCCGG GCCCGCGCGT 
ACCGACGACA TCGAACTGCG GGCGTCGTGG ACGCCGACGA ACACCGATCT ACGACCCCAC 
GGCGAGGCGT TCTCGTTGGC GCTTTCGCAC TACGCGGGTC TTCCGCCCGT AGGGGTCACC 
GTGTTCGGGC AAGGACGCGG ACGCTGA
 
Protein sequence
MVTSMTQAPE EFRAAVAALR SVTPRPEVTL EPIKAPQRLA PWTFALAAET TGPDDIPATG 
RLVLLHDPSG QDGWNGVFRL VVYMRAELDA ELATDPFLPA VGWSWLTDAL DTAGASWTAL 
GGTVTETSSA RFGDISGPAR TDDIELRASW TPTNTDLRPH GEAFSLALSH YAGLPPVGVT 
VFGQGRGR