| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24090 |
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| Symbol | |
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| ID | 8387733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2598467 |
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| End bp | 2599528 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976452 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003134233 |
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| Protein GI | 257056401 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.157192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0237176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATT CTCCTGCGTC GGCCCGTCGA GACCTCTCCG ATGCGCCGCT TCTCGTCGCC
GCGCGGGGTG GCACACCCGC GCACGTTCCC GTGTGGTTCA TGCGTCAGGC GGGGCGGTCG
TTGCCCGAGT ACCGGAAAGT CCGGGAGGGC GTGCCCATGC TCACCGCCTG CTTCGATCCC
GAGTTACTCG CCGAGATCAC ATTACAGCCG GTGCGCAGGC ACGGCGTGGA CGCCGCGATC
CTGTTCAGTG ACATCGTGGT GCCCCTGTAC GCGGCGGGGA CGGACATCGA CATCGTGGCG
GGCACGGGGC CCGTGGTGGC GCACCCGGTG CGTTCCCGGG CCGATGTGGC CGCCCTGCCC
CGGTTGGAGC CGGAACAGCT GAAACCGGTC GCCGACGGTG TGCGGTTGCT GGTGGAGCAG
CTCGGCCGTA CCCCGTTGAT CGGTTTCGCC GGTGCGCCGT TCACGTTGGC GTCCTATCTG
ATCGAAGGCG GACCGAGCAA GGACCACGCC CGCACCAAGG CGCTCATGCA CGGTGAGCCC
GAGCTGTGGC ACGAATTGGC GGGTGCGCTC GCGCAAACCG CGCTGACGTT CCTCCGCGTC
CAACTGGACG CCGGTGTGGA CGCCGTGCAG CTGTTCGACT CGTGGGCGGG CGCGCTCTCG
GCCAAGGACT ACCGCGAGTT CGTGTTACCG CACTCGACCA CGGTGCTGGA GGGGATCGCC
TCCTACGGCG TGCCCCGCAT CCACTTCGGG GTGGGGACCG GTGAACTGCT GGCGGACATG
CGAGACGCCG GCGCCGACGT GGTGGGCGTC GACTGGCGGG TGCCGTTGGA CGAGGCCGTG
CGTCGACTGA CCACTTCCGA CCGCCCGGCG CCGGTGGTGC AAGGCAACCT CGACCCGGCC
CTGTTGACGG CACCGTGGCC GGTGATCGAG GCCGAGGTCC GGCGCATCGT CTCCGAGGGG
CGGGCCGCGG GTGGACACAT CTTCAACCTC GGACACGGCG TGCTTCCGGA GACCGACCCG
GAAGTGTTGA CCAGGATCGT GGAGTTGGTG CACAGCCTGT GA
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| Protein sequence | MTNSPASARR DLSDAPLLVA ARGGTPAHVP VWFMRQAGRS LPEYRKVREG VPMLTACFDP
ELLAEITLQP VRRHGVDAAI LFSDIVVPLY AAGTDIDIVA GTGPVVAHPV RSRADVAALP
RLEPEQLKPV ADGVRLLVEQ LGRTPLIGFA GAPFTLASYL IEGGPSKDHA RTKALMHGEP
ELWHELAGAL AQTALTFLRV QLDAGVDAVQ LFDSWAGALS AKDYREFVLP HSTTVLEGIA
SYGVPRIHFG VGTGELLADM RDAGADVVGV DWRVPLDEAV RRLTTSDRPA PVVQGNLDPA
LLTAPWPVIE AEVRRIVSEG RAAGGHIFNL GHGVLPETDP EVLTRIVELV HSL
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