| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24080 |
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| Symbol | |
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| ID | 8387732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2597022 |
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| End bp | 2598470 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644976451 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_003134232 |
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| Protein GI | 257056400 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.143554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0261132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGGAA ACGCCGAAGA CGGCCGCCGG CGCGGAGCCC GACCGTCCCG GGTGGTGGTG
GTCGGGGCGG GGATCGCCGG CCTTGCCGCC GCGTGGCGGC TTCGCGCCGA ACTGGGAGCG
GAAGCGCAGA TCACCGTGTG CGACGCGGCG TCCGTACCCG GGGGGAAGGT GCGGACCGTC
GAGGTGGCGG GGCGACGGTT CGACGTGGGC GCCGAAGCCG TGCTCGCCAG ACGGCCGGAG
GCGGTGACAC TGATCCGTGA GGTCGGGCTC GGCGACGACC TCGTACACCC GACGTCCGCC
TCATCCGCCA TCCGTGCCCT GGGGCGTACG GTGCCGATGC CGAAGGGCAC GATGATGGGC
ATCCCGGCTT CGGCCGAGGC GGTGGCGGAC GTGCTGTCCC AGGACGGGGT CGAGGCGGTC
GCGGCGGAGG CCGGAGGACC GCCGCTGTCG TTGCCGGACC ACGACGTGTC CCTGGGCGGC
CTCCTGCGTA GCCGGTTCGG CGATGAAGTG GTGGACCGGC TCGTCGACCC GCTGCTGGGC
GGGGTCTACG CCGGGGGAGC GGACGGACTG GGGCTGCGGG CCACCCTGCC CGCTGTGGCC
GCGGCCGTGG ACGCGGGTGC GACGTCGCTG ACCGAGGCGG TCGCCAGGAC GCTGCCGGAA
CGGCCCAGTT CGGCGCCCGT GTTCGCGACG CTGCGCGGCG GCCTGGGTGA TCTCGTGGAT
CGACTCGTCG AGAGCGGCGC CGTCGAACTC CGCCTCGGAC AGCCCGTACG TGAACTCGTC
CGGCGCCCTT CCGGGGGGTG GCGGCTGCGG ACCGGGGCAG CGGCGCTCTC CCATGCCCCC
GCCGACGCCG AGTTGGACGC CGACGCCGTG GTACTCGCGG TACCTCCGCC CGCGGCGAGC
AGGCTGCTCG CCACAGTGGC CCCGGACGCC GCGTCCGCGT ACGCCGAGAT GGAACTGGCG
TCGATGGCGG TCGTCGCCCT GGCGCTGCCT CCCGGCACGG AGTTGCCGCC ATCGTCGGGG
ATCCTGATCG GAGAGCGGGA ACGGCGTGCC GACGGTACGC GGTTCACGGC GAAAGCCTTC
ACCTTCTCGG CCCGCAAATG GGAGCACCAC AACCGGCCGG GTGAGCCGGT GCTGATCCGA
GGATCGGTCG GCCGGTTCGG CGAGGTGAGC ACGCTTCAGG CCTCCGACGA CGAGCTGGTC
GAACGCGTGC GCCGTGATCT CGCCGAACTG ACCGGCATCA CCGCCTCGCC GGTGGACACC
TACGTCATGC GCTGGGGTGG GGGCTTGCCG CAGTACAGCG TGGGGCATCT CGATCGTGTC
GCGCGTATCG AACGGGCCGT CGCCGGGCTC GACGGGCTCG CGGTCGCCGG TGCGGCTCTG
CATGGTGTGG GACTGCCCGC ATGTGTGGCC ACCGGGGACG CGGCAGCCCG CCGTGTAGTG
GGACAATGA
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| Protein sequence | MKGNAEDGRR RGARPSRVVV VGAGIAGLAA AWRLRAELGA EAQITVCDAA SVPGGKVRTV
EVAGRRFDVG AEAVLARRPE AVTLIREVGL GDDLVHPTSA SSAIRALGRT VPMPKGTMMG
IPASAEAVAD VLSQDGVEAV AAEAGGPPLS LPDHDVSLGG LLRSRFGDEV VDRLVDPLLG
GVYAGGADGL GLRATLPAVA AAVDAGATSL TEAVARTLPE RPSSAPVFAT LRGGLGDLVD
RLVESGAVEL RLGQPVRELV RRPSGGWRLR TGAAALSHAP ADAELDADAV VLAVPPPAAS
RLLATVAPDA ASAYAEMELA SMAVVALALP PGTELPPSSG ILIGERERRA DGTRFTAKAF
TFSARKWEHH NRPGEPVLIR GSVGRFGEVS TLQASDDELV ERVRRDLAEL TGITASPVDT
YVMRWGGGLP QYSVGHLDRV ARIERAVAGL DGLAVAGAAL HGVGLPACVA TGDAAARRVV
GQ
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