Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_24000 |
Symbol | |
ID | 8387724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2589194 |
End bp | 2590738 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644976443 |
Product | alpha/beta hydrolase family protein |
Protein accession | YP_003134224 |
Protein GI | 257056392 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0638812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCGCC GTGGTCGTGC TCGCCGACAA CTCGTCGTGT CCGCGCTGGT GGCGCTGCTT GCCGCGGGCT GCACCGCGGG ACCGTCGACG CGGCCCCCGG TGGTCGAGAA CGACGGTGAG CCCGCTCCTT CCACCACCGA GGCCTCGCGG GAGGTGCCCC TGCCGGAGCT GGCCGAACCC CGCGGCCCGT CACTGTCGTG GGAGAAATGC GACCCACTGC TGCTGGAGGG GCTGGATCGC GGTGACGACG CGCCGAGCGT GTCCTGCGCC CGCATCATGG CGCCGCTCGA CGCCCCCGGC CTACCGGGGT TGGGCCTCAC CCGACTCGGA CTCACCAAGG TCGGCGACGG CTCCGTGCCG TTGGTGGTGT TGAACGGCCT CGGGGGTGAG CCGGGGACCC GGTACGCGGT GCGGTTGGCC GACACGCTGC CCGAGGAGAT CCTGCGGACG TTCTCGTTGA TCGGCGTCGA CCGCCGGGGG ACGGGGTCCT CCGAGCCCAT CCAATGCATT CCGCCCGAGG AGCGGCAGAC CCTGTTGGGG CACGATCCCA CGACCACCGT GGACCCGATC CTCGACGCGG CCAGGACGGC CGGTCAGCAG TGCGCCCTCA ACCTGGAGGA CGCCCAGACC GCGTACGACA GTTGGCGCAC CGCCGGCGAC CTGGACGAGC TGCGGGCCCG ACTCGGCGTC CCGCGGCTCA ACATCCTGGC CCACGGCGAG GGTTCGACCT CCGCCGCCTA CTACGCGGCG CGGTTTCCCC AACACACGGG CCGTATCGTG CTCGACGGTG TGCCCGACCC CTCGACCGAC CTGACCATCG GACTCGGCGA CATCGCCGCC GCGGCGGAGG CCACGCTGGA CCGGTTCGCC GCCGACTGCG CCGACCAGGA TTGTCCGCTC GGCGATGACG CCCGCGCCGC CGTGACCGCC CTCGCCGACG ACGCCCGCGC GACACCGCTG CGGGTGGGTG AGCACCGGAT GAGCTCGACG CTCGTGCTTC GCGCCGTCCT CACCGGGTTG GCCCAACCGG ACCGCTGGTC GGAGCTGGCC GACGCGATCG CGGCAGCGCG TAAGGGCGAC GGCGAGGCGC TGTTCGGTTT CGTGAAGCCG TGGCTTGCGG ACACCGGCCG GTGGAAGGCC AGGGCGGACA GCGTTCTCGT CACGCGCTGC AACGACACCG AACCCCGACT GCCCAGCGAT CGGATCCGGC AGGTGTCGCG CCAACTCGGC GACGAGCACC CCGTGTTCGG TGCCGTGGTG GCCCAGCAGC TCGCGTGGTG CAGTCCGTGG CCGAACCGGC AGGAGGAGAT GCCGGAACTC GGCTCCCCCG ACGCCCCGCC GATCCTGGTG CTCAGCACCG CCGCCGATCC GGTCACCCCT GAAAAGGGCA CCATCCGCGC GGCGGAGCGG ATTCCGGGGG CGGTCCGGAT CGCCTGGCAG GGAGCGGGAC ACGGCGCGCT CGGCTCCGGC TGCGTCGCCG ACGAGGTCAC CGCGTTCCTC GTCGACGGGG TCGTGCCGGA GGACGGTACC TTGTGCCCCG CCTGA
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Protein sequence | MPRRGRARRQ LVVSALVALL AAGCTAGPST RPPVVENDGE PAPSTTEASR EVPLPELAEP RGPSLSWEKC DPLLLEGLDR GDDAPSVSCA RIMAPLDAPG LPGLGLTRLG LTKVGDGSVP LVVLNGLGGE PGTRYAVRLA DTLPEEILRT FSLIGVDRRG TGSSEPIQCI PPEERQTLLG HDPTTTVDPI LDAARTAGQQ CALNLEDAQT AYDSWRTAGD LDELRARLGV PRLNILAHGE GSTSAAYYAA RFPQHTGRIV LDGVPDPSTD LTIGLGDIAA AAEATLDRFA ADCADQDCPL GDDARAAVTA LADDARATPL RVGEHRMSST LVLRAVLTGL AQPDRWSELA DAIAAARKGD GEALFGFVKP WLADTGRWKA RADSVLVTRC NDTEPRLPSD RIRQVSRQLG DEHPVFGAVV AQQLAWCSPW PNRQEEMPEL GSPDAPPILV LSTAADPVTP EKGTIRAAER IPGAVRIAWQ GAGHGALGSG CVADEVTAFL VDGVVPEDGT LCPA
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