| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23940 |
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| Symbol | |
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| ID | 8387718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2581938 |
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| End bp | 2583074 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976437 |
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| Product | penicillin-binding protein, beta-lactamase class C |
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| Protein accession | YP_003134218 |
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| Protein GI | 257056386 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0755223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0888544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCCC TACGTATTCC CGTACTCGGC GCGGTCCTGT CACTTGCGGC CACCGCCTTC
ATCGGACCCG CCGTCGCAGT GGCGTCCGAA ACGGAAACCG CCGCCGAGAT CCTGCGGGAA
GGCGCCCAGC TCGGGGTCGA CAACGGATAT CCCGGGGTGA TCGGCCTGGT CCGCGACGGT
ACGGACACAG AATATGTCCA GGCCGGACTC GGCGACCGTT TCACGAGGGT CCCCGCCGAC
CCGCAAGCCC GCTTCCGCAT CGGTAGTAAC ACCAAGGCGT TCATCGCCAC CGTGCTGCTG
CAGTTGGAAG CCGAAGACCG GCTCTCACTC GACGACACAC TCGACACCTG GTTGCCCGAT
GTGTTCGCAC GAAGCGGCCA TGACGGTTCG ACGATCACCG TCCGGCAATT GCTCAACCAC
ACCTCCGGGC TGCCGGAGTA CCTCAACGAC CCTCGAGTGC TGGCGTCCTA CGCCGCGAAC
CTCAACCCCT ACAGGAAGTG GGAGCCCCGG AAGCTGGTGG AGATCGCCCT CCGGCAAGGG
GCCACCGGCG CCCCCGGGGA ACGACACAGC TACTCCAACA CCAACTACCT GTTGGCGGGC
ATGGTGATCG AAGCCGTCAC CGGCAATCCG CCCCACGTCG AGGTCCGGCA GCGCATCATC
TCCCCGCTCG GCCTGCACGA CACCAGCTTC CCCACCGACC CTCGGCCGCA GGGCGAGTGG
CTGCGCGGAT ACTTCCGGAT CGGTGGATTC CTACGGGACG TGACCGTGTC CAATGTGGAT
ATCACTGGCT CCGCCGGGGC CATGGTTTCC ACTTTGGACG ACCTGGCGAC GTTCGAGCGA
GCACTGCTGT CGGGCGAGTT GCTGCCCGAA CCACAGCTGG CCGCTCTGAA GGACACCGTA
CCGCTCACCG AGGACGGGTC CGCGGGCGCG GGGCTGGGCG TTTTCCTGAC ACCGACGCCC
TGCGGACCGG TATGGCAACA CTCCGGCGCG CTCCTCGGCT ACACCACGTT GTGGTTGACC
AGCGACGACG GTGACAAGCA AGTCGTCGTG GCCGCCAACG AGTATCACCT GGTGGGCGGC
GGCCCAGGCG AGCAGCACAT CGCCCGGGCC GCGGTGGAGG CCTACTGTGC CCTCTGA
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| Protein sequence | MRPLRIPVLG AVLSLAATAF IGPAVAVASE TETAAEILRE GAQLGVDNGY PGVIGLVRDG
TDTEYVQAGL GDRFTRVPAD PQARFRIGSN TKAFIATVLL QLEAEDRLSL DDTLDTWLPD
VFARSGHDGS TITVRQLLNH TSGLPEYLND PRVLASYAAN LNPYRKWEPR KLVEIALRQG
ATGAPGERHS YSNTNYLLAG MVIEAVTGNP PHVEVRQRII SPLGLHDTSF PTDPRPQGEW
LRGYFRIGGF LRDVTVSNVD ITGSAGAMVS TLDDLATFER ALLSGELLPE PQLAALKDTV
PLTEDGSAGA GLGVFLTPTP CGPVWQHSGA LLGYTTLWLT SDDGDKQVVV AANEYHLVGG
GPGEQHIARA AVEAYCAL
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