Gene Svir_23880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23880 
Symbol 
ID8387712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2575534 
End bp2576454 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content65% 
IMG OID644976431 
Producthypothetical protein 
Protein accessionYP_003134213 
Protein GI257056381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0124929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.141412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAA CCGAACGCGG CGAGGTCACG GGGCAGGCTG GGCGGACTCG GCGGGTGCGC 
AAGCTCGGCA AACGCATCTC TGAGGCCCGG CGGCTGCGCG GCCTGGTCCG TGATCCCGAC
CTGCAGGCCG TCGAGCTGGA ACGGCGGGGC CGCAAAACGT TGGCCGGGTT GTGGTTCTTC
CTCGCCCTCG GATTGATCTA CACCACCGAG GGAGTGCATG CGTTCCTCTC CGAGGGCACC
ACACCCGCTG ATCCGTTGTG GTGGGCGGCC TGGACGGTGG AGCCGATGTT CGCCGGACTG
CTGATCACCC TGCTGAACTT CGAATCGGTG ATCCTGTCCC ACGGTGTCGC ACCAGATCAT
CGGTGGTGGT CGCGCCTGAA GCACGTGCTC TTGGCCTCCA CGCTGGCGAT GAACGTCATC
CCCCAGCTCG CTCCGCTGCT GCGCGGACAG TGGGAGCGGT TCAACCTCGG CTCGCTGGCG
GTGCATGCGA TCATCCCGGT CATCGTCTAC GGCATCGCCG AAGTCATCCC CGTGATTCAG
GCTCGGCAAC GTGAGCTCGT CCTCGCGATC TACGAGCAGG CTGACCAGTA CGAGGCTCGT
CATACCACGG CGGAAGCGCC GGAGGCGGAG CAGGACGAGT CCCCTGTCCC GCCCGCACCG
GTTGAACAGG TGACGGAACC GACGTTGCCT GCCGTTCCCC GTTCGGAACC GACTTCGCTT
CGTAAGGCGC CGTCTGTGTT GGGCAAACTT CCCGGTGCGT TGCGAGAGAC AGTGATCGCC
CTTGCGGCCG ATGCGCATCA GCAGGGGCGT CCAGTGACCG CTGAGGACAT CACACGAAGG
GTGACGCTAC CGGAAGCGTT GGTGACCGCG CTCGTGGAAG AGCTGAACAC CACGGTCAAC
CATCACCCGA TTCCCGCCTG A
 
Protein sequence
MDQTERGEVT GQAGRTRRVR KLGKRISEAR RLRGLVRDPD LQAVELERRG RKTLAGLWFF 
LALGLIYTTE GVHAFLSEGT TPADPLWWAA WTVEPMFAGL LITLLNFESV ILSHGVAPDH
RWWSRLKHVL LASTLAMNVI PQLAPLLRGQ WERFNLGSLA VHAIIPVIVY GIAEVIPVIQ
ARQRELVLAI YEQADQYEAR HTTAEAPEAE QDESPVPPAP VEQVTEPTLP AVPRSEPTSL
RKAPSVLGKL PGALRETVIA LAADAHQQGR PVTAEDITRR VTLPEALVTA LVEELNTTVN
HHPIPA