Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23880 |
Symbol | |
ID | 8387712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2575534 |
End bp | 2576454 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644976431 |
Product | hypothetical protein |
Protein accession | YP_003134213 |
Protein GI | 257056381 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0124929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.141412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAAA CCGAACGCGG CGAGGTCACG GGGCAGGCTG GGCGGACTCG GCGGGTGCGC AAGCTCGGCA AACGCATCTC TGAGGCCCGG CGGCTGCGCG GCCTGGTCCG TGATCCCGAC CTGCAGGCCG TCGAGCTGGA ACGGCGGGGC CGCAAAACGT TGGCCGGGTT GTGGTTCTTC CTCGCCCTCG GATTGATCTA CACCACCGAG GGAGTGCATG CGTTCCTCTC CGAGGGCACC ACACCCGCTG ATCCGTTGTG GTGGGCGGCC TGGACGGTGG AGCCGATGTT CGCCGGACTG CTGATCACCC TGCTGAACTT CGAATCGGTG ATCCTGTCCC ACGGTGTCGC ACCAGATCAT CGGTGGTGGT CGCGCCTGAA GCACGTGCTC TTGGCCTCCA CGCTGGCGAT GAACGTCATC CCCCAGCTCG CTCCGCTGCT GCGCGGACAG TGGGAGCGGT TCAACCTCGG CTCGCTGGCG GTGCATGCGA TCATCCCGGT CATCGTCTAC GGCATCGCCG AAGTCATCCC CGTGATTCAG GCTCGGCAAC GTGAGCTCGT CCTCGCGATC TACGAGCAGG CTGACCAGTA CGAGGCTCGT CATACCACGG CGGAAGCGCC GGAGGCGGAG CAGGACGAGT CCCCTGTCCC GCCCGCACCG GTTGAACAGG TGACGGAACC GACGTTGCCT GCCGTTCCCC GTTCGGAACC GACTTCGCTT CGTAAGGCGC CGTCTGTGTT GGGCAAACTT CCCGGTGCGT TGCGAGAGAC AGTGATCGCC CTTGCGGCCG ATGCGCATCA GCAGGGGCGT CCAGTGACCG CTGAGGACAT CACACGAAGG GTGACGCTAC CGGAAGCGTT GGTGACCGCG CTCGTGGAAG AGCTGAACAC CACGGTCAAC CATCACCCGA TTCCCGCCTG A
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Protein sequence | MDQTERGEVT GQAGRTRRVR KLGKRISEAR RLRGLVRDPD LQAVELERRG RKTLAGLWFF LALGLIYTTE GVHAFLSEGT TPADPLWWAA WTVEPMFAGL LITLLNFESV ILSHGVAPDH RWWSRLKHVL LASTLAMNVI PQLAPLLRGQ WERFNLGSLA VHAIIPVIVY GIAEVIPVIQ ARQRELVLAI YEQADQYEAR HTTAEAPEAE QDESPVPPAP VEQVTEPTLP AVPRSEPTSL RKAPSVLGKL PGALRETVIA LAADAHQQGR PVTAEDITRR VTLPEALVTA LVEELNTTVN HHPIPA
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