| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23710 |
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| Symbol | |
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| ID | 8387695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2562670 |
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| End bp | 2564079 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976418 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003134200 |
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| Protein GI | 257056368 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.876933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.277036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAG CCGTGCAGTG GCGCGGCACC GATCGGGTGT TGCTGGGTTT GTTGTGTGCG
GTGCAGTTCG TGTTGATCGT GGACGTGGTC GTGGTCAACA TCGCGGTGCC GTCGATCCAG
GCTGACTTGG TGGTGCCGGG ATCGTTCCTG CAGCTCACCA GCGTGGCTTA CACCGTGGTG
TTCGGAAGCC TGTTGATCGT GGCGGGCCGG GCGGGGGACC TGTTCGGGCG TCGACGGGTG
CTGTTGCTGG GCTTGACCGT GTTCACGGTG ATGTCGCTGC TGTGCGGTCT GGCCCAGGCG
GGATGGTGGC TGTTCGCCGC GCGTGCCGGT CAGGGCCTGG GTGCGGCGAT GGTGTCGTCG
AACGCGATGG CGCTGCTGGT GGGGATCTTC GCCGAGGGGG AGCTGCGTAA CCGGGCGTTG
GGCATCTGGG CGGCGGTGAG CTCGGCCGGG GCGATCGCCG GGCAGGTACT CGGTGGTGTG
GTGACCGAAT TCATCGGGTG GCGGGGGATC TTCCTGATCA ACGTGCCGTT CGGGGTGTTG
GTGGTCGCCG TGGCGCTGCG GTTGCTTCCG GAGGTCAAGG CCGAAGCGTC CTCGCGGGTG
GACGTGCTGG GAGGCGTGCT GCTGGTGGTG ACGCTCGGCG GGATGAGCCT GTTGTTGGCC
GATGTCGCCG ACGGTGCTTC CGGGATCCTC GTGCCCGCTG TGGTGGTGCT GGCCGGATTG
GCCGCGGTGC TGGTGATGGT GGAGCGGCGA CATCCGGAAC CGGTGTTGCC GGGGGCGTTG
TTGGCACGAC GTTCGGTGTC GGTGGCGAAC CTGGTGCTGA TGCTGAACGC AGCCGCCACC
ACGGCGGGGC TGTACTTCAC GACGCTGACG ATGCAGAACG AGATGGGGTA CTCGCCGCTG
CAGACCGGGT TCGGATTCGC GCCGGTGACC CTGATCGTGT TGCTGCTGTC GCCGCGCGCG
GGCGCGTTGG TGGGGCGTAT CGGCGCTCGG AGGCTGCTGT TGATCGGTTC CGCCACCGCA
GGCACGGGAC TGTTGGTGCT GGTGTTCACC GCTCATGGCG AGGGTACGTA CTGGACCGGG
GTTCTGCCGG GGCTTGCGTT GTTGGCGGCG GGCAACGGGT TGTCCTATGC GCCGACGTTC
TCCTTGGCCA CGGCCGTCCC CGAGGATGAG CACGGCCGTG CTTCCGGGCT GATCAACACC
GCGCAGGAAT TGGGCTCGGC GACCGGGTTG GCGGTGTTGG CCTCGGTCGC CGTACTCGGT
GCGCTCGGCG GGCTCGGCGG TTTCTCCACC GGCTACCTCG CCGCAGCACT CGCCGCGTTC
GCGGCCGGCC TGCTCGCGAT CGCCGCTTCC GAGTCCGCAT CCGCTATGGG GCCGAGTCCG
AGTTCGCGTG AGACGAGAGC GGAGCTATGA
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| Protein sequence | MATAVQWRGT DRVLLGLLCA VQFVLIVDVV VVNIAVPSIQ ADLVVPGSFL QLTSVAYTVV
FGSLLIVAGR AGDLFGRRRV LLLGLTVFTV MSLLCGLAQA GWWLFAARAG QGLGAAMVSS
NAMALLVGIF AEGELRNRAL GIWAAVSSAG AIAGQVLGGV VTEFIGWRGI FLINVPFGVL
VVAVALRLLP EVKAEASSRV DVLGGVLLVV TLGGMSLLLA DVADGASGIL VPAVVVLAGL
AAVLVMVERR HPEPVLPGAL LARRSVSVAN LVLMLNAAAT TAGLYFTTLT MQNEMGYSPL
QTGFGFAPVT LIVLLLSPRA GALVGRIGAR RLLLIGSATA GTGLLVLVFT AHGEGTYWTG
VLPGLALLAA GNGLSYAPTF SLATAVPEDE HGRASGLINT AQELGSATGL AVLASVAVLG
ALGGLGGFST GYLAAALAAF AAGLLAIAAS ESASAMGPSP SSRETRAEL
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