Gene Svir_23500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23500 
Symbol 
ID8387674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2539749 
End bp2540597 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content66% 
IMG OID644976401 
Producthypothetical protein 
Protein accessionYP_003134183 
Protein GI257056351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000552937 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.53291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGACGA ATGTGCCCAG GCATGCGGTG GATCCCGACC TCGCGCGTCG GCAGGTCGCC 
GTCATCGCGC CGAAGGTCGA TGTCTTCCTC AGCTATGTCG AGCGAAAAGC CAGCGCCCTG
ACCGCGGTGC ACCAATGGGC GATCACCGCG GCCCAGTACC GGTGCGTGCT CGACCCGGAC
GTGACCCAAA GCGACACGTG GCATGACCTG CGCATCGCCG AGCAGGCCGC GGCGGCGATC
TTCGCCGCCG CCCAGGCATC GGACGGTGAG GTGCCCTACG AGATCGGTGG GAACACGGTG
CGGATTCCCG CGACCGGCCC GGTTTCGGCG GCCAACGGAG GAAAGTGGCT CACCGTGGTG
TGGCTGGCCG TGGCGTTGCG AGACGAGGAC ACGGTTCAGC GACTGTGTGC CGTTCCTCTG
GATACGCTGC GCGCATCGGG TGCGCAGCAC GACGACTACA TGTACGCATG GGTGGAAACG
CTGCAGAGAT TTCTGCGCAA GGAACCCATA CCGCCGGAAT TGTTCACGGC GGCGATGCGG
GGTACCGACC CGGACGAGGC CCGGATCGCC TCCGGCGACG CGATGCTCCA GCTGGTCTAT
CCGCCCATCA AGATGTTCTA CTACCTGCTA CGTCGTGACG AGCGCCTGTT CAACGAGGCA
CTCGAACAGG CCCTCACACT TCACCGGGGG TACTGGACAG CGGAGGACAG AGCAGACGAC
CCCGACGGCT TTCTCGCGCT GGCGCCGCTC GGAGTGGCGG TACTCGCGCG CAAAGTGGGA
CTGGCCATCG ATGTACGTTC CGAGTACCTG CCTTCCGGGC TCCTCGAGGG GCGGGAGCCG
GGGCAGTGA
 
Protein sequence
MMTNVPRHAV DPDLARRQVA VIAPKVDVFL SYVERKASAL TAVHQWAITA AQYRCVLDPD 
VTQSDTWHDL RIAEQAAAAI FAAAQASDGE VPYEIGGNTV RIPATGPVSA ANGGKWLTVV
WLAVALRDED TVQRLCAVPL DTLRASGAQH DDYMYAWVET LQRFLRKEPI PPELFTAAMR
GTDPDEARIA SGDAMLQLVY PPIKMFYYLL RRDERLFNEA LEQALTLHRG YWTAEDRADD
PDGFLALAPL GVAVLARKVG LAIDVRSEYL PSGLLEGREP GQ