Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23500 |
Symbol | |
ID | 8387674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2539749 |
End bp | 2540597 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976401 |
Product | hypothetical protein |
Protein accession | YP_003134183 |
Protein GI | 257056351 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000552937 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.53291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGACGA ATGTGCCCAG GCATGCGGTG GATCCCGACC TCGCGCGTCG GCAGGTCGCC GTCATCGCGC CGAAGGTCGA TGTCTTCCTC AGCTATGTCG AGCGAAAAGC CAGCGCCCTG ACCGCGGTGC ACCAATGGGC GATCACCGCG GCCCAGTACC GGTGCGTGCT CGACCCGGAC GTGACCCAAA GCGACACGTG GCATGACCTG CGCATCGCCG AGCAGGCCGC GGCGGCGATC TTCGCCGCCG CCCAGGCATC GGACGGTGAG GTGCCCTACG AGATCGGTGG GAACACGGTG CGGATTCCCG CGACCGGCCC GGTTTCGGCG GCCAACGGAG GAAAGTGGCT CACCGTGGTG TGGCTGGCCG TGGCGTTGCG AGACGAGGAC ACGGTTCAGC GACTGTGTGC CGTTCCTCTG GATACGCTGC GCGCATCGGG TGCGCAGCAC GACGACTACA TGTACGCATG GGTGGAAACG CTGCAGAGAT TTCTGCGCAA GGAACCCATA CCGCCGGAAT TGTTCACGGC GGCGATGCGG GGTACCGACC CGGACGAGGC CCGGATCGCC TCCGGCGACG CGATGCTCCA GCTGGTCTAT CCGCCCATCA AGATGTTCTA CTACCTGCTA CGTCGTGACG AGCGCCTGTT CAACGAGGCA CTCGAACAGG CCCTCACACT TCACCGGGGG TACTGGACAG CGGAGGACAG AGCAGACGAC CCCGACGGCT TTCTCGCGCT GGCGCCGCTC GGAGTGGCGG TACTCGCGCG CAAAGTGGGA CTGGCCATCG ATGTACGTTC CGAGTACCTG CCTTCCGGGC TCCTCGAGGG GCGGGAGCCG GGGCAGTGA
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Protein sequence | MMTNVPRHAV DPDLARRQVA VIAPKVDVFL SYVERKASAL TAVHQWAITA AQYRCVLDPD VTQSDTWHDL RIAEQAAAAI FAAAQASDGE VPYEIGGNTV RIPATGPVSA ANGGKWLTVV WLAVALRDED TVQRLCAVPL DTLRASGAQH DDYMYAWVET LQRFLRKEPI PPELFTAAMR GTDPDEARIA SGDAMLQLVY PPIKMFYYLL RRDERLFNEA LEQALTLHRG YWTAEDRADD PDGFLALAPL GVAVLARKVG LAIDVRSEYL PSGLLEGREP GQ
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