Gene Svir_23470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23470 
Symbol 
ID8387671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2537111 
End bp2538160 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID644976398 
ProductABC-type metal ion transport system, ATPase component 
Protein accessionYP_003134180 
Protein GI257056348 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00129815 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG AGGCGCGACC GGGGACACCG CTGATCGAGC TACGCGACGT CACCAAGGTG 
TTCACCACGG CGGGCCGAGG CCGGGTCACC GCCCTCGACG GTATCGATCT CACCATCGAG
GCCGGCGACA TCTTCGCGAT CATCGGCTAT TCCGGTGCGG GCAAGAGCAC CCTGGTGCGG
TTGATCAACG CGTTGGAGCG CGTCACGTCC GGCCGGGTCA TCGTGGACGG CATCGACCTG
ACCACGTTGA GCGAACGCAG ACTGCGGGAG GTCCGCCGGG GGATCGGCAT GATCTTCCAG
CAGTTCAACC TGTTGCGTTC GCGCACCGTG TTCGGCAACG TCGCCTATCC GTTGAAGATC
GCGGGCTGGT CGAAGGCGGA CATCGAAAAA CGCGTCGCGG AGCTGCTGAA CTTCGTCGGC
ATCCTCGACA AGGCGTGGCA CTACCCCGAC CAGTTGTCGG GCGGGCAGAA ACAGCGTGTG
GGCATCGCGC GGGCCCTGGC CACCAACCCG AAGATCCTGT TGGCCGACGA GTCCACCAGC
GCGCTCGACC CGGAGACGAC GGCGGACGTG CTGCGACTGC TCAAGCGGGT CAACACCGAA
CTCGGGGTGA CGATCGTCGT GATCACCCAC GAGATGGAGG TGGTCCGTGA GATCGCGGAC
CGGGTGGCCG TGCTCGATTC GGGTCGCATC ATCGAACAGG GCCGAGTGCT GGACGTGTTC
ACCGACCCCC AGCACGAGAC CACTCGCCGG TTCGTCGGAA CGGTGCTGCG GGATCAGCCC
GAAGGCACCA ATCTGGAACG CATCCGCGCC CGCCATCCGG GGCGGCTGGT GACGGCCCGG
GTACGCGACG ACCGCAACAT CGGCGCGGTG CTCTCGAACG CCCACGCCCG ACACGGGGTG
AGTTTCGAGA TCGTCTACGG CGGGATCAAG GAATTGGCCG GCCAGTCGTT CGGCGGCCTG
ACCTTGGAAC TGATCGGTGA CGACTCAGGC GTCGACGCGC TGATCGCCGA ACTCCGTGAG
ATCACGGAGG TACAGGAGGT GGCATCGTGA
 
Protein sequence
MSSEARPGTP LIELRDVTKV FTTAGRGRVT ALDGIDLTIE AGDIFAIIGY SGAGKSTLVR 
LINALERVTS GRVIVDGIDL TTLSERRLRE VRRGIGMIFQ QFNLLRSRTV FGNVAYPLKI
AGWSKADIEK RVAELLNFVG ILDKAWHYPD QLSGGQKQRV GIARALATNP KILLADESTS
ALDPETTADV LRLLKRVNTE LGVTIVVITH EMEVVREIAD RVAVLDSGRI IEQGRVLDVF
TDPQHETTRR FVGTVLRDQP EGTNLERIRA RHPGRLVTAR VRDDRNIGAV LSNAHARHGV
SFEIVYGGIK ELAGQSFGGL TLELIGDDSG VDALIAELRE ITEVQEVAS