Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23420 |
Symbol | |
ID | 8387666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2530082 |
End bp | 2531014 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644976393 |
Product | carbohydrate ABC transporter membrane protein |
Protein accession | YP_003134175 |
Protein GI | 257056343 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.93855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGA CCGCAGCACG TGACGCGAAG GCGTCCGTCC CCGATTCCGA CACCGGTGCG GCGACCGGCC GCACCGGTCC CCACCCGATC ATGGCTGTGC CCGCGTTGGC CTTCTTCGGC GTCTTCGCGT TGGTGCCCCT GGTCGGTGTG GTCGTGCTCA GTTTCGTGCA CTGGGACGGT ATCTCGGCCA TGACCTGGGC CGGATTCGAC AACTGGGGAG AGGTGCTCAC CGACCCCACG ACGCTACGCG CGGTCTGGCT CAGCGTCCAG GTCATGGTCT TCAGCTGGCT GGTGCAGACC CCCATCTCGC TGTTGCTGGG CGTGCTGATC GCCGGACGTG GTCGCTATCG GGCCGTACTC GGGGTGCTGT ACTTCCTGCC GATGCTGCTG TCGTCGGCGG CCATCGCCAT CTCGTTCAAG GCGTTGTTGG ACCCGAATTT CGGGATGAGT CTGGCGTTCA ACGCGCAGGT GTTGGCCCAG GACTGGCTGG GAGACCCCAG TCTGGCGCTG TACGTCGTCG TGTTCGTGAT CGCCTGGCAG TTCGTGCCGT TCCACACTCT GCTCTACCAG GCGGGGGTGC GGCAGATCCC GGCGTCGTTG TACGAGGCGG CGCAATTGGA CGGTGCGGGC CGGATCCGGC AGTTCTTCCA CATCACCCTG CCCCAGCTGC GGTACACGAT CATCACCTCG TCCACGCTCA TGCTCGTCGG TTCGTTGACC TATTTCGACC TGGTGTTCGT GCTGACCGGG GGAGGGCCGG GCGAGGCGAC GCGCATGTTG CCGCTCGACA TGTATCTCAC CGGGTTCTCG AGCAACGAGA TGGGTAAGGC CAGTACGCTC GCCGTCCTTC TGGTGGTCAC GGGACTCGCG TTGGCCCTGG GGCTGTCCCG GTGGGCGAAT TTCCGTCGCG GTAGCCAGCT GGAGGGGGCG TGA
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Protein sequence | MTVTAARDAK ASVPDSDTGA ATGRTGPHPI MAVPALAFFG VFALVPLVGV VVLSFVHWDG ISAMTWAGFD NWGEVLTDPT TLRAVWLSVQ VMVFSWLVQT PISLLLGVLI AGRGRYRAVL GVLYFLPMLL SSAAIAISFK ALLDPNFGMS LAFNAQVLAQ DWLGDPSLAL YVVVFVIAWQ FVPFHTLLYQ AGVRQIPASL YEAAQLDGAG RIRQFFHITL PQLRYTIITS STLMLVGSLT YFDLVFVLTG GGPGEATRML PLDMYLTGFS SNEMGKASTL AVLLVVTGLA LALGLSRWAN FRRGSQLEGA
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