Gene Svir_23220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23220 
Symbol 
ID8387646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2505165 
End bp2506022 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content65% 
IMG OID644976375 
Producthypothetical protein 
Protein accessionYP_003134157 
Protein GI257056325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAG AGAGCGCGCT CATCATGCCG GTCGGGTACG GCTGGCATGA CCATGCGTGC 
TGGTTTCACA CCGGAAGTGA AGCCTGGCGG GAGATGCTCG TACCGTTCTT CAGTGAGGGC
GCGGCCCGCG GGGAGCGCCT GCTCTATGTC TCCCACAGGA GTACCGACGA ACTGGTCGGG
GACCTGAGTC CATTGCCCGC ACGTGATGAG CTGTTGCGGG GCGGGGATCT GACATTGCTG
TCGCTGGAGG CCTATCGGGG AACCGCCGAC GAATCCGTCC TGAACGAACA GGTAGCACAG
ATACGGAAGG CCGCCGTCAC CACGGTCGAG GCCGGATACC GGGGTCTGCG CCTGGCCGTC
GATTCGGCGC ATCCGATCCG AAGCGGGGAC GACATCGCCC CCTTCGTACA CGCCGAAATG
ATGTTCGACG AGATCGCGGC GCGATTACCG GTGCTTCTGC TGTGCGGATA CGACGGCCGT
TACGTCGACC GATCCGCCGC CGCCGCGCTC GCGTTCGTCC ATCCCATCCG GCAACGTGTC
GTGTTCGGTC TCGGTTGCGC GCTCTACGCC GATGGCGAGG AGGAACACAG CTGGCGTCTG
CGAGGGGAAC TCGACCTGGC CTCGCGTGAG GTGTTGGAGG TCGCGCTCAA GGCGTTACCC
GTCCACGGTG ATGTGCATCT CCACCTCGAT GCCCTGACCT TCATCGACGG GAACAGCACC
TACGCCTTGG CCGAGTTCGC CGAGCGGATC GCACCCCATC GGCTCGTGCT CCACGATCCC
CCCACCGTGT TGTCTCGGAT AGTCGAAGTG TCCCGCGACG AATTCCCCGG CTTGCGTCAG
ATCGCGTCGG TCCGCTGA
 
Protein sequence
MRRESALIMP VGYGWHDHAC WFHTGSEAWR EMLVPFFSEG AARGERLLYV SHRSTDELVG 
DLSPLPARDE LLRGGDLTLL SLEAYRGTAD ESVLNEQVAQ IRKAAVTTVE AGYRGLRLAV
DSAHPIRSGD DIAPFVHAEM MFDEIAARLP VLLLCGYDGR YVDRSAAAAL AFVHPIRQRV
VFGLGCALYA DGEEEHSWRL RGELDLASRE VLEVALKALP VHGDVHLHLD ALTFIDGNST
YALAEFAERI APHRLVLHDP PTVLSRIVEV SRDEFPGLRQ IASVR