Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23210 |
Symbol | |
ID | 8387645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2503815 |
End bp | 2505011 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976374 |
Product | hypothetical protein |
Protein accession | YP_003134156 |
Protein GI | 257056324 |
COG category | [S] Function unknown |
COG ID | [COG1690] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.280562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.598303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGT ACACGACGAT CGAGGGAGCG AGGACGGATA TCCGGCTGTG GACGGACCCT GCGACAGTGG AGGACGAGGC GCTGCGTCAG CTCCACAATG TCACCACGCT CCCCTGGATC CACGGTGTGG CGGTCATGCC CGACGTCCAC TACGGCAAGG GGGCCACTGT CGGCAGCGTC ATCGCGCTGC GTGATGCCGT GTCCCCGGCG GCCGTCGGGG TGGACATCGG CTGCGGCATG TCCGCGGTAC GCACTTCGTT GACCGCCTCG GACCTGCCCG ATGACCTCGG TCCGCTCCGG AAGCGGATCG AGGACGCCGT CCCGGTGGGA TTCGACATGC ACGACAGGCC CGTCGACGTG GCGAGGGTGA CCGGCGTCGG CGGGTGGGGC GAGTTCTGGT CCCGGTTCTC CTCCCTGCAC CCGGGGGTGC AGAAGCTGCG GGAGCGCGCG CACCGACAGC TGGGCACGCT CGGGGGCGGT AACCACTTCA TCGAGGTGTG CCTGGAGCAG GGCGGTGAGG ACGACGGCCG GGTGTGGCTC ATGCTGCACT CCGGGTCCCG GGGCATCGGT AACGAGCTCG CCAAGCGCCA CATCGAGATC GCCAAGAGCC TGCCGCACAA CGCCGACCTG CCCGACCGGG ATCTCGCCGT GTTCGTGACG GGCACTCCGG AGATGGAGGC GTACCGGAAC GACCTGTACT GGGCCCAGGA GTACGCCGCC CGTAACCGGG CCACGATGCT GGCCCTGGTG AAGAAGGCCC TCGCCGACGA GGTGCCGGGC GTGCGGTTCG ACGAGCCGAT CTCGTGCCAT CACAACTACG TGGCCGAGGA GCGCTACGAC GGCGTGGACC TGATGGTGAC CCGCAAGGGG GCGATCCGGG CGGCCAAGGG GGACCTGGGC ATCATCCCCG GCAGTATGGG CACCGGCTCG TACATCGTGC GGGGACTGGG CAACGAGGCG TCGTTCCAGT CCGCCTCCCA CGGTGCGGGC AGGAGGATGA GTCGGGCGAA GGCCCGTCGG TCGTTCACCG CCGCCGACCT CGCCGAGCAG ACGCGAGGCG TGGAGTGCCG GAAGGACGCG GGGGTCGTCG ATGAGATCCC CGGCGCCTAC AAGGACATCG ACTCGGTGAT CAAGGCGCAG TCGGACCTGG TGGAGGTGGT CGCTCACCTC AAACAGGTCG TGTGCGTCAA GGGCTGA
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Protein sequence | MSVYTTIEGA RTDIRLWTDP ATVEDEALRQ LHNVTTLPWI HGVAVMPDVH YGKGATVGSV IALRDAVSPA AVGVDIGCGM SAVRTSLTAS DLPDDLGPLR KRIEDAVPVG FDMHDRPVDV ARVTGVGGWG EFWSRFSSLH PGVQKLRERA HRQLGTLGGG NHFIEVCLEQ GGEDDGRVWL MLHSGSRGIG NELAKRHIEI AKSLPHNADL PDRDLAVFVT GTPEMEAYRN DLYWAQEYAA RNRATMLALV KKALADEVPG VRFDEPISCH HNYVAEERYD GVDLMVTRKG AIRAAKGDLG IIPGSMGTGS YIVRGLGNEA SFQSASHGAG RRMSRAKARR SFTAADLAEQ TRGVECRKDA GVVDEIPGAY KDIDSVIKAQ SDLVEVVAHL KQVVCVKG
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