Gene Svir_23210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23210 
Symbol 
ID8387645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2503815 
End bp2505011 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content69% 
IMG OID644976374 
Producthypothetical protein 
Protein accessionYP_003134156 
Protein GI257056324 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.280562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.598303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGT ACACGACGAT CGAGGGAGCG AGGACGGATA TCCGGCTGTG GACGGACCCT 
GCGACAGTGG AGGACGAGGC GCTGCGTCAG CTCCACAATG TCACCACGCT CCCCTGGATC
CACGGTGTGG CGGTCATGCC CGACGTCCAC TACGGCAAGG GGGCCACTGT CGGCAGCGTC
ATCGCGCTGC GTGATGCCGT GTCCCCGGCG GCCGTCGGGG TGGACATCGG CTGCGGCATG
TCCGCGGTAC GCACTTCGTT GACCGCCTCG GACCTGCCCG ATGACCTCGG TCCGCTCCGG
AAGCGGATCG AGGACGCCGT CCCGGTGGGA TTCGACATGC ACGACAGGCC CGTCGACGTG
GCGAGGGTGA CCGGCGTCGG CGGGTGGGGC GAGTTCTGGT CCCGGTTCTC CTCCCTGCAC
CCGGGGGTGC AGAAGCTGCG GGAGCGCGCG CACCGACAGC TGGGCACGCT CGGGGGCGGT
AACCACTTCA TCGAGGTGTG CCTGGAGCAG GGCGGTGAGG ACGACGGCCG GGTGTGGCTC
ATGCTGCACT CCGGGTCCCG GGGCATCGGT AACGAGCTCG CCAAGCGCCA CATCGAGATC
GCCAAGAGCC TGCCGCACAA CGCCGACCTG CCCGACCGGG ATCTCGCCGT GTTCGTGACG
GGCACTCCGG AGATGGAGGC GTACCGGAAC GACCTGTACT GGGCCCAGGA GTACGCCGCC
CGTAACCGGG CCACGATGCT GGCCCTGGTG AAGAAGGCCC TCGCCGACGA GGTGCCGGGC
GTGCGGTTCG ACGAGCCGAT CTCGTGCCAT CACAACTACG TGGCCGAGGA GCGCTACGAC
GGCGTGGACC TGATGGTGAC CCGCAAGGGG GCGATCCGGG CGGCCAAGGG GGACCTGGGC
ATCATCCCCG GCAGTATGGG CACCGGCTCG TACATCGTGC GGGGACTGGG CAACGAGGCG
TCGTTCCAGT CCGCCTCCCA CGGTGCGGGC AGGAGGATGA GTCGGGCGAA GGCCCGTCGG
TCGTTCACCG CCGCCGACCT CGCCGAGCAG ACGCGAGGCG TGGAGTGCCG GAAGGACGCG
GGGGTCGTCG ATGAGATCCC CGGCGCCTAC AAGGACATCG ACTCGGTGAT CAAGGCGCAG
TCGGACCTGG TGGAGGTGGT CGCTCACCTC AAACAGGTCG TGTGCGTCAA GGGCTGA
 
Protein sequence
MSVYTTIEGA RTDIRLWTDP ATVEDEALRQ LHNVTTLPWI HGVAVMPDVH YGKGATVGSV 
IALRDAVSPA AVGVDIGCGM SAVRTSLTAS DLPDDLGPLR KRIEDAVPVG FDMHDRPVDV
ARVTGVGGWG EFWSRFSSLH PGVQKLRERA HRQLGTLGGG NHFIEVCLEQ GGEDDGRVWL
MLHSGSRGIG NELAKRHIEI AKSLPHNADL PDRDLAVFVT GTPEMEAYRN DLYWAQEYAA
RNRATMLALV KKALADEVPG VRFDEPISCH HNYVAEERYD GVDLMVTRKG AIRAAKGDLG
IIPGSMGTGS YIVRGLGNEA SFQSASHGAG RRMSRAKARR SFTAADLAEQ TRGVECRKDA
GVVDEIPGAY KDIDSVIKAQ SDLVEVVAHL KQVVCVKG