Gene Svir_23200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23200 
Symbol 
ID8387644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2502731 
End bp2503552 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID644976373 
Producthypothetical protein 
Protein accessionYP_003134155 
Protein GI257056323 
COG category[S] Function unknown 
COG ID[COG3861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02271] conserved domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.738381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.721654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACGA CATTACGTCC GGAGGAACTG ATCGACAACT CGGTCGTCGA CATGGAAGGC 
CGCAAGATCG GCAAGGTCGG CACCGTCTAT CTGTCCGACG AATCCCGGCA GCCTGAGTGG
GTCACCGTGA AGACCGGGCT TTTCGGCCAG AAGGAGAGCT TCGTCCCCCT GCAGGGTGCC
TACCTGGAGT CCGACGGTAT TCACGTCCAG ACGTCCAAGG AGAAGGTGTC CGAAGCGCCC
CGGATCGACA CCGACACCGA CCTCTCGGGG GAGGAAAGTG CGGAACTGTA CACGCACTAC
AACCTTCCCG CCCCCAGGGG GGCCATGCCC GAGGAGCGGA GTCGGACGGA CACGGAGACC
CGCTCCGAGC AGGGGACGAC CGGTGCCGCC GGAGCCCGGG GTCGAACTGA CGAGCGAACA
GGGCCCCGCT CCGAAGGCGA GGCGATGGTG CGCTCCGAGG AGCACTTGCG GGCCGGCACC
GAGGAGACGG AAAGCGGTCG GGTCCGGCTG CGCAAGTACG TGGTGACCGA AGAGGAGCAG
ATGAATGTTC CGGTGTCCCA CGAAGAGGTC CGGATCGAGC GCGAACCGAT CAGTGAATCC
GACCGTTCGG CTCCCCACGA CATCGGGGAG GAGGAACAAG AGGTGATCCT GCACCGCGAA
CAGGCGCGGG TCACCAAGGA GAACGTGCCG GTGGAGAAGG TCCGCCTCGG CAAGGAGAAG
GTCACCGAGG AGGAGACCGT CGCCGGTGAG GTCCGCAAGG AGAAGTTCGA CATCGAGGAG
GAAGAGGGAG GTCGTCGCGG CCGACGCGGC CGCAACACCT GA
 
Protein sequence
MATTLRPEEL IDNSVVDMEG RKIGKVGTVY LSDESRQPEW VTVKTGLFGQ KESFVPLQGA 
YLESDGIHVQ TSKEKVSEAP RIDTDTDLSG EESAELYTHY NLPAPRGAMP EERSRTDTET
RSEQGTTGAA GARGRTDERT GPRSEGEAMV RSEEHLRAGT EETESGRVRL RKYVVTEEEQ
MNVPVSHEEV RIEREPISES DRSAPHDIGE EEQEVILHRE QARVTKENVP VEKVRLGKEK
VTEEETVAGE VRKEKFDIEE EEGGRRGRRG RNT