| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23190 |
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| Symbol | |
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| ID | 8387643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2501002 |
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| End bp | 2502276 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976372 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003134154 |
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| Protein GI | 257056322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.108135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.595786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCG CGTTCTCCAA CCGGAACTAC CGACTGTGGG CCTTGGCCGA TCTGGTGTCC
GTCACGGGGA CCTGGATGCA GGTGCTCGGC CTGAACTGGG TCGTGATGGA ACGCACCGGC
TCCGCGACTT CCGTAGGCCT GTCGGTGGCG TTCAGCACCA TCCCCGCGAT GGTGTGCGGT
CCGTGGGCGG GGGCCTTGGC CGACCGCGTG TCCCCCCGAC GCATCATCGT GATCGGGGAG
TCGCTGCATC TGGTCATCGC CTTGCTGCTG GCCGTCACGG TGTGGCACGG CTTGCCGTTG
CCCGTGCTGT TCGCGCTCAC CACGATCGCG GGCTTGGTCG GCACGTTCGA GGGTCCGGCT
CTCGGGCGCT TCGCCAGCCA GGTCGTGCCG CGTTCCGACC TCGGCAACGC GTTGGCATGG
AACTCCGTGA CCAACGCCGT GGGCAGGGTG CTCGGCATGA GTCTTGCGGG GGTACTCGCG
GCTGTGATCG GTGAGCCCGC GTTGTTCTGC CTCAACGCGG CCAGTTTCGG GGCCGTCATC
GCCACCGTGC TGGTGATGCG TTCGGCGCAG TTCCACCCGT TGGCCAGGAG CACCCGTGAG
TACGCCGGGG TCATGGCGGG ACTGCGATAC CTGCGCACCC AACATGTGCT GTTGGTGTTG
TTCGCCCTGG GGTTCGTACT GTCGTCGCTC GGTCGCAACT ACCAGGTCAC GATGGCCGCG
ATGGCGGAAG GCCCCTTGAA CGCGGGCTCG GCGGGGTACG GGACGTTGTC GTCGGTGTTC
GCCGTCGGCA CGGTCCTCGG AGGGCTCGCC GCGGCTCGGG TCAAAGACTT CACCCTGCCG
TTGTTGCTGG TGGCGGCGGG GGTGACGAGT GTGCTGCAGG CGGTCAGCGG ATTCGTTCCG
GGACTGACGG GATTCGCTCT GATGCTCCTG CCCATCGCGG CGGGCGCGGT GGTGATCGAC
ACCATCAAGA GCACCCGACT GCAGTTGGAC GCCGCCGACA GCATGCGGGG CCGTGTGTTG
GCGGTGCAGG GGACAGTGGC CGGGGGCGCC GGCGCGCTCG GGGCGCCCGC CCTCGGCTGG
CTGTCCGAAC GACTCGGGCC CCAGGAAGCC CTACTCGTCG CCGGGGTGGT GACGCTCGCG
GCCACCTGCG CGGCGGCGGC TGTGCTGCGG TCGTTGGCGC GGCGTCCGTC CTCCTCGACC
GACTCGGCCG AACCCGAGGA GACGTTCTCG ACCTCCGGGG CGGGGAAACC GGCCGATTCG
TTGACAGCGG CGTGA
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| Protein sequence | MLRAFSNRNY RLWALADLVS VTGTWMQVLG LNWVVMERTG SATSVGLSVA FSTIPAMVCG
PWAGALADRV SPRRIIVIGE SLHLVIALLL AVTVWHGLPL PVLFALTTIA GLVGTFEGPA
LGRFASQVVP RSDLGNALAW NSVTNAVGRV LGMSLAGVLA AVIGEPALFC LNAASFGAVI
ATVLVMRSAQ FHPLARSTRE YAGVMAGLRY LRTQHVLLVL FALGFVLSSL GRNYQVTMAA
MAEGPLNAGS AGYGTLSSVF AVGTVLGGLA AARVKDFTLP LLLVAAGVTS VLQAVSGFVP
GLTGFALMLL PIAAGAVVID TIKSTRLQLD AADSMRGRVL AVQGTVAGGA GALGAPALGW
LSERLGPQEA LLVAGVVTLA ATCAAAAVLR SLARRPSSST DSAEPEETFS TSGAGKPADS
LTAA
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