| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23100 |
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| Symbol | |
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| ID | 8387634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2485999 |
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| End bp | 2487318 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976363 |
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| Product | squalene-associated FAD-dependent desaturase |
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| Protein accession | YP_003134145 |
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| Protein GI | 257056313 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.620646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.191871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGTGG CCGGATCCGG GTTGGCGGGC CTCACCGCGG CCTGCGATCT GGCCGACGCC
GGAGTCTCGG TGACGCTGTT GGAATCCCGC GCGCGGCTGG GCGGGGCGAC GTTCTCCTTC
CAGCGGGGCG GCATGACCGT CGACAACGGA CAGCATGTGG TGCTGCGATG CTGTACCGCT
TACCTGCGGC TGCTCGAACG CCTGGGCAGT TCCGCGGGCA TGGCGGTACA GGAACGCTTC
CGTGTGCCGG TGCTCGCGCC GGGAGGACGG TTCACGGAGT TGCGGCGTAT CGACGTCCCG
GCGCCGCTGC ACCTGTTGCC CGCGATCGCC CGGTACAGGG CCTTACGGCC GATCGATCGC
GCACGGGTCC TCCGCGCCGC GCTGGCGTTG CGTTCACTCG ACCCGGACGA CGAGTCCCTG
GACTCCCACA ATTTCGGTGA TTGGCTCGCC CGACACGGGC AGAACGACGA GACCCGCGAC
AGACTGTGGA ACCTGATCAC GGTCGCCGCC CTCAACGGCC ACGTGTCCCA GGTGTCGTTG
GCCTCGGCGG CGAAGGTGTT CCGCACGGCC TTGCTCGACG CCCCGGATGC CGCGGACATC
GGGATCCCGC GTTGGCCGCT GGAGGATCTG CACGTACGTC CCGCGGAGAA ATACCTGATC
GAACGCGGCG GCCGGGTGCG GACCCACAGC CCGGTCCGGG GCGTCACGCC CGTGCGGGAT
CGGTTCCTGG TGCGTTTGGA CGACGAGGTC CTCGAAGCCG ACGCGGTCGT CCTCGCCGTG
CCTCCCGAGA CGGCGGCCCG CGTGTGCCCC GAGCGGGCCG GGCTCCAGCG ATGGCGACTC
GTGCGACTGG GCGCGGTCCC GATCGTCAAC GTGCACGTGG TCTACGAACG TCCGGTCACC
GACCTCTCCT TCGTCGCGGC GGTGTCATCG CCGGTGCAGT GGGTGTTCGA CCGCACCGAC
GCCGCCGGAC TGACCACAGG CCAGTACCTG ACGGTGTCGT TGTCGGCGGC CGAATCGTGG
CTCACCACCC CGGCCTCGAC GCTGCGGGAG GTCTTCCTCA CCGAACTCGG CCGCTTGTTC
CCCGAGGCGG CGACGACACC GCATTCCCGG TTCTTCGTCA CCCGACAGCG AAGGGCCACG
TTCCGCCAGA GCCCCGGCTC GAACAGCTTG CGTGCGGACC AGCGCACGGC GTTGCCCGGC
CTCGTCCTCG CCGGCTCCTG GACCGCGACT GGTTGGCCCG ACACCATGGA GGGAGCCGTG
CAAAGTGGAC ATCGAGCCGC CGACCTCGTT CTCGCTCAGC TGGCTGGAGG TGTGAGGTGA
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| Protein sequence | MVVAGSGLAG LTAACDLADA GVSVTLLESR ARLGGATFSF QRGGMTVDNG QHVVLRCCTA
YLRLLERLGS SAGMAVQERF RVPVLAPGGR FTELRRIDVP APLHLLPAIA RYRALRPIDR
ARVLRAALAL RSLDPDDESL DSHNFGDWLA RHGQNDETRD RLWNLITVAA LNGHVSQVSL
ASAAKVFRTA LLDAPDAADI GIPRWPLEDL HVRPAEKYLI ERGGRVRTHS PVRGVTPVRD
RFLVRLDDEV LEADAVVLAV PPETAARVCP ERAGLQRWRL VRLGAVPIVN VHVVYERPVT
DLSFVAAVSS PVQWVFDRTD AAGLTTGQYL TVSLSAAESW LTTPASTLRE VFLTELGRLF
PEAATTPHSR FFVTRQRRAT FRQSPGSNSL RADQRTALPG LVLAGSWTAT GWPDTMEGAV
QSGHRAADLV LAQLAGGVR
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