| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23060 |
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| Symbol | |
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| ID | 8387630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2481426 |
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| End bp | 2482430 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644976359 |
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| Product | hopanoid biosynthesis associated radical SAM protein HpnH |
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| Protein accession | YP_003134141 |
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| Protein GI | 257056309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.1711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGGC ACCAGAGTCT GCGCATCGCG CGCTACCTGA TGGTCCAGAA ATTACGGCGA
CGTTCGAAGT TCCCGTTGAT CGTGGAACTG GAGCCGTTGT TCGCGTGCAA CCTGAGCTGC
CCCGGATGCG GCAAGATCCA ACACCCCGCG AGCGTGCTGA AACAACGCAT GCCGGTGGAG
CAAGCGGTGG CCGCCATCGA GGAGTGCGGG GCTCCCATGG TGTCGATCGC GGGCGGCGAA
CCGTTGATGC ACCCCGACAT CGACACGATG GTCAACGAAT TCGTGCGCCG GAAGAAGTAC
GTCTTCCTGT GCACCAACGC CGCCCTGCTC CGGCGGAAGA TCGACAAGCT CGACCTGAAG
CCGTCGCGGT ACTTCGCGTT CGCCATCCAC GTCGACGGAC TGCGGGAACG ACATGACGCC
GCCGTCGACA AGGAAGGTGT GTTCGACGAG GTGATCGAGG CGATCGCCGA GCTGAAAAAG
CGTGGTTTCC GGGTCACCAC GAACACGACC GTGTTCAACA CCGACACACC GCAGACTCTG
ACCGAGGTGC TCGACTTCCT CAACGACGAG ATCGAGGTGG ACCAGATGAT GGTCTCGCCC
GCCTACGCCT ACGAGAAGGC TCCCGACCAG GAACACTTCC TCGGCGTCCA GGAGACTCGG
GAGCTGTTCC GCAAGGCGTT CTCAGGAGGC AATCGGAAGC GTTGGCGACT CAACCATTCG
CCGTTGTTCC TCGACTTCCT CGAGGGCAAA GTGGACTTCG AATGCACCGC GTGGGGGGTG
CCGTCGTACT CCCTGTTCGG CTGGCAGAAG CCGTGTTATC TGATGAGCGA CGGCTACGCC
CGCACCTATG CCGAACTCGT GGAGACCACC GACTGGGACG CCTACGGCCG GGGTAGGGAC
CCTCGCTGCG CGAACTGTAT GGCGCACTGC GGTTACGAAC CCACTGCCGT GTTGGCCACG
CTCGGTTCGC TCAAGGAATC ACTCCGGGCC GCCCGGGGCC TGTGA
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| Protein sequence | MPWHQSLRIA RYLMVQKLRR RSKFPLIVEL EPLFACNLSC PGCGKIQHPA SVLKQRMPVE
QAVAAIEECG APMVSIAGGE PLMHPDIDTM VNEFVRRKKY VFLCTNAALL RRKIDKLDLK
PSRYFAFAIH VDGLRERHDA AVDKEGVFDE VIEAIAELKK RGFRVTTNTT VFNTDTPQTL
TEVLDFLNDE IEVDQMMVSP AYAYEKAPDQ EHFLGVQETR ELFRKAFSGG NRKRWRLNHS
PLFLDFLEGK VDFECTAWGV PSYSLFGWQK PCYLMSDGYA RTYAELVETT DWDAYGRGRD
PRCANCMAHC GYEPTAVLAT LGSLKESLRA ARGL
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