| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23020 |
|---|
| Symbol | |
|---|
| ID | 8387626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2476542 |
|---|
| End bp | 2477417 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644976355 |
|---|
| Product | ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| Protein accession | YP_003134137 |
|---|
| Protein GI | 257056305 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0484452 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTGCCT CGCCCACCTC GGTGAACGGG GCGGTGGCGA CGAAGCCAGC GGCGAAAGGG
GCGAACGTGC GGCGGGAAGA TCCGGTCGGC ACCGGCGGTA CACAGCCGGA GCATCCCCTG
TTCGAGATCC AGGGTGTCAC GGTGCGCTTC GGCGGTCTCA CCGCGCTGTC GGACGTGTCG
CTCACGGCCT GGCCACAAGA GGTGCACGGC GTGATCGGCC CCAACGGCGC GGGCAAGACC
ACCCTGTTCA ACGTCTGTTG TGGATTCGTG CGGCCCGCGG AAGGAGTGGT CCGCGTCCGG
GGCGAGACGG TGCCACACCC ACGCCCGCAT CAGTTGGCGC CGCTCGGTAT CGCCCGCACG
CTCCAGGGAC TCGGATTGTT CCGTGGGCTC ACGGTGTTGG AGAACGTCAT GGTCGGCGCC
GACCGATTCC GCCGGTCGGG ATTCGTCTCC GCGCTGTTGG GGCTGCGACG TTCGGTGTCC
GACGAGCGGG CCCTGCGGCT CAAGGCGGAA GCGGTGTTGC AGGAACTCGA CATCCACACC
TACGCCACCG CGCTGCCCGA CAGCCTGCCG TACCCCGTGC GGAAACGCGT GGCACTGGCC
CGGGCACTGG TCTCGGAGCC GGAACTTCTG CTCCTCGACG AACCGGCGAG CGGACTGGGG
CACGACGACA TGGGCGAACT CGGTGAGCTC GTGCGCGCGC TGTCCGACCG AATGGCGGTT
GTGCTCGTCG ACCACCACAT GGACCTCGTG ATGTCGGTGT GCGACCGGAT CACCGTTCTC
GACTTCGGCA GGGTGATCGC GTCGGGGACC CCGGACGAGA TCGCCGCGGA CCCCGCCGTG
GTGACGGCGT ACCTGGGGGA GGAGGCACGC GCATGA
|
|---|
| Protein sequence | MRASPTSVNG AVATKPAAKG ANVRREDPVG TGGTQPEHPL FEIQGVTVRF GGLTALSDVS
LTAWPQEVHG VIGPNGAGKT TLFNVCCGFV RPAEGVVRVR GETVPHPRPH QLAPLGIART
LQGLGLFRGL TVLENVMVGA DRFRRSGFVS ALLGLRRSVS DERALRLKAE AVLQELDIHT
YATALPDSLP YPVRKRVALA RALVSEPELL LLDEPASGLG HDDMGELGEL VRALSDRMAV
VLVDHHMDLV MSVCDRITVL DFGRVIASGT PDEIAADPAV VTAYLGEEAR A
|
|---|
| |