| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23000 |
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| Symbol | |
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| ID | 8387624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2474863 |
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| End bp | 2475741 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976353 |
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| Product | branched-chain amino acid ABC-type transport system, permease component |
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| Protein accession | YP_003134135 |
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| Protein GI | 257056303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.135077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0410828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAT TCGTCGACCT CACCCTCAAC GGCATCAGCC AGGGCGCGAT CTACGCCGCG
TTCGCGTTGG CCCTGGTGCT CATCTGGCGC TCGACCCGCA TCGTCAACTT CGCGCAGGGT
GCGATGGCCA TGCTCACCAC CTACTTCGCG CTCGCCCTCA TCGAGAGCGG CCAGCCGTAC
TGGGTGGGGT TCGTGGTCGC GCTCATCGCG GGGTTCGTGC TCGGAGTGGT ACTGGAGCGC
CTGCTCATCC GGCCCGTGGA GGGCGGCCCC GAGCTGAACG CCGTCATCGT GACGTTGGGC
TTGTTCGTCG CCCTCCAGGC GTTGGCCGCG ATCCTGTTCG GTTCCTCCTA CGAATCCTTC
CCGGCGCCGT TCTCCCTCAC CGGGTTCTCC GTGGGTGGGA CCACGGTGGC GTTCACACCG
TTCAACGCGT TCGTCGTGCT CGCGGTGCTC GCCGTGATGC TCGCGCTCGT CGCGCTGTTC
CGGCTCACCG ACCTCGGACT GCGGATGCGT GCCTCCGCAC TGCACAAGGA GGTGTCCCGG
CTGCTCGGGA TCCGCGTCGG TCACATGCTC ACGCTCGGCT GGGCGCTGGC CGCCGTGGTG
GGGTCGTTGG CCGGTCTGCT GATCGCCGGG GGAAGCCTGA TCCACCCGGC GTACATGGAA
CCGGTCATCG TGTTCGGATT CGTGGCTGCG GTCCTGGGCG GGCTCGACAG CCCGACCGGT
GCGGTGGTCG GAGGACTCCT CGTCGGCCTC GCGCTGTCCT ATGTGTCCGG CTACCTGGGC
AGTGAACTCG TGGCCCTGGC GGCACTCGCG ATCCTCGTCG CGGTGCTGCT CGCCCGCCCC
CAAGGACTGT TCGGCCGCAC GACCGAGAGG AAGGTCTGA
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| Protein sequence | MQRFVDLTLN GISQGAIYAA FALALVLIWR STRIVNFAQG AMAMLTTYFA LALIESGQPY
WVGFVVALIA GFVLGVVLER LLIRPVEGGP ELNAVIVTLG LFVALQALAA ILFGSSYESF
PAPFSLTGFS VGGTTVAFTP FNAFVVLAVL AVMLALVALF RLTDLGLRMR ASALHKEVSR
LLGIRVGHML TLGWALAAVV GSLAGLLIAG GSLIHPAYME PVIVFGFVAA VLGGLDSPTG
AVVGGLLVGL ALSYVSGYLG SELVALAALA ILVAVLLARP QGLFGRTTER KV
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