| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22990 |
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| Symbol | |
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| ID | 8387623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2473792 |
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| End bp | 2474862 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976352 |
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| Product | ABC-type branched-chain amino acid transport system, permease component |
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| Protein accession | YP_003134134 |
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| Protein GI | 257056302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0910597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0451282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGC CGACTACCAC GACGACGAGC GCCCTGCGGC GGTTCCTCCC GTCGTCCTTC
CCGGCGCGTC ATCTCCTCGT CACCGTGCTG GCGCTGGTGG TCGTGGTACT GGTGTGCGAG
AACGTCTCCG CGTTCCGGCA CGCGCAGCTG GCTGCCATGG CCTACTACGC GATCGCGGCG
GCCGGACTGA CCGTGCTCAC CGGACTGAAC GGCCAGATCT CCCTAGGACA CGGCGCCCTC
ATGGCGGTGG GCGCGTACAC CACCGCTCTC CTGCTGCGCG ACGATGACCT GCCGTTCGGT
GTCGTCATGC TCGCCGCCAC GACGCTCACC GCGCTCGTCG GGATCGTCGT CGGCGCGGCC
GCAGCGCGGT TGAAGGGGCC GTACCTCGTC GGGGCCACGC TCGCGCTCGC GGTCGGCCTG
CCGGGGTTGG CGGTGCACTT CGACGGGGTC CTCGGCGGGG AACAAGGACT TCCGGTGAAC
ACGCCGCGGC CCGCGCAGTG GTTCGACGAC GCGATGTTCT TCATCACCGG GTCCGAACTG
GGCCACCAGA AGTTCCTCGC CTATGTGGCC TGGGGGACGT TGCTGCTCGT CCTCCTGCTG
CTGGCCAACC TCGTGGCGGG GCGGTACGGA CGGGTGTGGC GCGCGGTGCG GGACGACGAG
GTCGCCGCCG CGTTGGCCGG AATCCATCTC GGCCGGGCAC GGATCCTGGC GTTCGTCGTC
AGCGCCGCCT GCGCCGGACT GGCCGGTTCG GTGCTGGCGA TGGTGGTGCG CCTGACCGCG
CCCAGCGGGT TCACGATCGT GCTGTCGTTG TCCCTGCTCA CGGCGGTGGT GGTCGGTGGG
CTCGGCAGTC TCACCGGCGC GGTGCTGGGC AGTGCGCTGC TGGTGTTCCT CCCACCCGCG
GTGACCGATC TGGGTACCGA GCTCGGTCTG ACCGCCGTCC GCGCGGCGCA ACTCGCACCC
CTCGTCTACG GGATCGTGCT GGTGGCCGCG ATGCTCGCCG CTCCGTCGGG AGTGGTCGGT
CTCGGTCGCC GCGTGTGGAA CCGGGTACGG AACGGAAAGG ATGACGGATG A
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| Protein sequence | MSQPTTTTTS ALRRFLPSSF PARHLLVTVL ALVVVVLVCE NVSAFRHAQL AAMAYYAIAA
AGLTVLTGLN GQISLGHGAL MAVGAYTTAL LLRDDDLPFG VVMLAATTLT ALVGIVVGAA
AARLKGPYLV GATLALAVGL PGLAVHFDGV LGGEQGLPVN TPRPAQWFDD AMFFITGSEL
GHQKFLAYVA WGTLLLVLLL LANLVAGRYG RVWRAVRDDE VAAALAGIHL GRARILAFVV
SAACAGLAGS VLAMVVRLTA PSGFTIVLSL SLLTAVVVGG LGSLTGAVLG SALLVFLPPA
VTDLGTELGL TAVRAAQLAP LVYGIVLVAA MLAAPSGVVG LGRRVWNRVR NGKDDG
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