| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22980 |
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| Symbol | |
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| ID | 8387622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2472464 |
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| End bp | 2473768 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976351 |
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| Product | amino acid-binding protein |
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| Protein accession | YP_003134133 |
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| Protein GI | 257056301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0512293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.104714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGGG CACTCCTCGC CGGTCTGGCC GCCTCCATGG TGTTGTCGGC GTGCGGTGCG
GGTGGGCGGC CCGACGGGGA GGCGGGCGGT GCGGAGGCCG GTGTCACCGA CGACACGGTG
ACCATCGGGG CCCACTTCCC GCTCACGGGG GTCGCCGCGC CCGGCTACAG CGAGATCCCC
ACCGGGGCCA AGGCGTACTT CGACTTCGTC AACGCCCAGG GCGGCGTCCA CGGGCGCACC
ATCGAGTACA TCTACAAAGA CGACGCCTAC AACCCGACCA ACACCAGCCA GGTGACGAAC
GAACTCGTGC TGAGCGACGA GATCTTCGCG ATGGTCGGTG GTCTGGGCAC CCCCACCCAC
AGCGCGGTGC TCGACTTCTT GAACGACAAC GAGGTCCCCG ACCTGTTCGT CTCGTCGGGT
TCGTTGCTGT GGAACCAGCC CGACCGCTAT CCGTGGACGT TCGGGTGGCA GTCGGACTAC
GAAAGCGAGG GCAAGGTCCT CGGCAAGTAC CTCGCCGAGA ACCACCCGGA CACGAAGGTG
GGCCTGCTGT TACAGGACGA CGACTTCGGG GAGGACGGCG AGAAAGGCAT CCGTGCCTAC
CTCGACTCCC AGATCGTGTC CGCGCAGCGG TACGCCCCGA CCGCCAACGA CATCACCCCT
CAGATCAGCG CGTTGAAAGA CGCCGGCGCG GAGATCGTCG TGGGATTCAC GGTGCCCTCG
TTCACCGCGT TGAGTCAGCT CGCCGCGCAG CGGCTGGACT ACCGACCCCA GTGGGTCTAC
AGCAACGTCG GTTCCGACTC CGCACTCGTC GGTTCGCTGT TGTCCCGCTT CACCGAGGGC
AAGGTCGAGG ACGCCAGTTC CCTGGAGGGC GCGCTGACCA CCGAGTACCT CGCCGGGGTG
GAGGACACCG ACGACCCATG GGTGCAGCTG TGGCAGCGGG TGTGGGACGC CCACGGAGAC
GACGGTGAAC TCACCAACTA CCGGATCTAC GGGATGGCGC AGGCTTACAC CTTCGTGCAG
GCGCTGCAGG CCGCGGGGCC GGAGCCGACC CGGCAGAAGT TGGTGCAGGC CTTGGAGACG
GTGGGCGGTG ACTTCGCCGG GCCCACGTTC GCGCCCTTCC GCTACTCGGA GGACTCCCAC
GCCGGCGTGT CGGGGGTGCG CGTCGCGCGG ATCGTGAAGG ACGGTACGGA GGCGTTGACA
CCCGTTCTGC TCACCGACAA CGGTGACGCC CCCATCACCA CCGCGGACCT CGAGCACGCT
CCACCACCCG AGGACGGGAT CCCGGACATC GAGCCGATGA GCTGA
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| Protein sequence | MTRALLAGLA ASMVLSACGA GGRPDGEAGG AEAGVTDDTV TIGAHFPLTG VAAPGYSEIP
TGAKAYFDFV NAQGGVHGRT IEYIYKDDAY NPTNTSQVTN ELVLSDEIFA MVGGLGTPTH
SAVLDFLNDN EVPDLFVSSG SLLWNQPDRY PWTFGWQSDY ESEGKVLGKY LAENHPDTKV
GLLLQDDDFG EDGEKGIRAY LDSQIVSAQR YAPTANDITP QISALKDAGA EIVVGFTVPS
FTALSQLAAQ RLDYRPQWVY SNVGSDSALV GSLLSRFTEG KVEDASSLEG ALTTEYLAGV
EDTDDPWVQL WQRVWDAHGD DGELTNYRIY GMAQAYTFVQ ALQAAGPEPT RQKLVQALET
VGGDFAGPTF APFRYSEDSH AGVSGVRVAR IVKDGTEALT PVLLTDNGDA PITTADLEHA
PPPEDGIPDI EPMS
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