Gene Svir_22960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22960 
Symbol 
ID8387620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2470692 
End bp2471201 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID644976349 
Producthistidine kinase 
Protein accessionYP_003134131 
Protein GI257056299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.573148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.329489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTCCC AGACCGCGCA GTTCGACGAT CTCCGCCTCG TCGCACTGCC CAGTGCCGTC 
AAGTGCACCG AGCTTTTCGT CCGGTTCTCT CTCACCGAGT GGTCGTTGCG CGAGCTGTTC
GACGAGGCCG CACGCGTGGC CCGTGAGCTG GTCACCGCCG TGGTGGAAAG AACCGACGAG
AAGTCTCCCG GTTTCGTGAC CGTCCGACTG CGACTGTCGG GCAACTCCTT GGTCGTGGAG
ATCGAAGACG ACCAGCTCGC ACACATGTAC GACGACGCCC CCACCGTGGA GGGGTATCCG
ACCGGCGCGG TTCCCTTGGA GGGCAAGGGC AAGCTCGTGT GGTGCGAGCT CCCGCTGCCC
AACGGCCTCA CGGCGGAGCA GGTGCGGCTG CCTCGACGCG ACGAGCGGCG AAGCGAACAG
CTGCCCGAAC CGGCTACCGA CGAACCGGCC GGCCCAGACC CCAGTGTCGT CGACCGTATC
CTCGTGGGCC TGCAGAATCG CGACTGGTGA
 
Protein sequence
MNSQTAQFDD LRLVALPSAV KCTELFVRFS LTEWSLRELF DEAARVAREL VTAVVERTDE 
KSPGFVTVRL RLSGNSLVVE IEDDQLAHMY DDAPTVEGYP TGAVPLEGKG KLVWCELPLP
NGLTAEQVRL PRRDERRSEQ LPEPATDEPA GPDPSVVDRI LVGLQNRDW