| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22730 |
|---|
| Symbol | |
|---|
| ID | 8387597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2446096 |
|---|
| End bp | 2446746 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644976326 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003134108 |
|---|
| Protein GI | 257056276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTGA GGCCGGCCCG AAGTGGTAGA TCAGACGCCA CGCGCCGGCG CATCCTGGAA
ACCGCTGAAC GACTGTTCGC CGAAAACGGT GTGGCCTCGG TGTCCAATCG GCAGATCAGC
GAGGCCGCCG GTCAGGGGAA CAACACCGCC GTCGGCTACC ACTTCGGGAC CAAAGTAGAC
CTCATCCGAG CCATCGTGCG TCGGCACGCC GAGAGCATCG AGCGACGTCG GTTGGAGATG
GTGGAACGAG CCGCGTCCTC GTCCCATCCC CGCGACTGGA TCCTGTGCCT GATACGTCCG
TTGGCCGACC ATCTGGACTC CTTGGGGAAT CCCACGTGGT TCGCACGTTT CAGCGCGCAG
GTCATGACCG ATCCGACACT GCGCGAGATC CTCTACGAGG ACGCACTGGC CTCACCCTCC
CTGCTGCGCA CGCTCGACGG CCTGCAGCAG TGTCTGCCCG AACTCCCGGT CGAGGTGCGG
CTGGAGCGCA GTGACATGAC ACGCCAGCTG ATGGTGCACA TGTTCGCCGA ACGGGAACGT
GCGCTCGCGG AACTGTCCAC CACCCCGCGG TCGAGCTGGC GTGCTGCGGC GGAGGGGTTG
GCCGACGCCA TCGTGGGGCT GTGGCTGGCG CCCGTCACGA CACGGCCGTG A
|
|---|
| Protein sequence | MSVRPARSGR SDATRRRILE TAERLFAENG VASVSNRQIS EAAGQGNNTA VGYHFGTKVD
LIRAIVRRHA ESIERRRLEM VERAASSSHP RDWILCLIRP LADHLDSLGN PTWFARFSAQ
VMTDPTLREI LYEDALASPS LLRTLDGLQQ CLPELPVEVR LERSDMTRQL MVHMFAERER
ALAELSTTPR SSWRAAAEGL ADAIVGLWLA PVTTRP
|
|---|
| |