| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22670 |
|---|
| Symbol | |
|---|
| ID | 8387591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2438475 |
|---|
| End bp | 2439836 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644976320 |
|---|
| Product | Na+/melibiose symporter-like transporter |
|---|
| Protein accession | YP_003134102 |
|---|
| Protein GI | 257056270 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAC TCGGCACCCG AACCCGTCTG GGGTACTCAC TAGGTTCTTT CGTCACCGGA
GCGTTCGGCA CCGTGCCGGG ACTGCTTCTG CTGCCCTATC TCACCGACAC GCTGGCCGTT
CCGGCGGCCG CCGCGGGGGC CATCGTGTTG CTGCCCAAGG CATGGGACGT CGTGTTCAAT
CCGGTGGCGG GTCGACTCTC CGACGCAGAC CTCGTACGGC GAGGCAGCCG TGTCAGGTCG
CTCGTGGTCG GAGGGCTCGC ACTCGCGGTC ACGTTCGCCG CTTTGTTCGC GTACCCCGGA
TTCGGCAGCG TCGGTGCCGA TTCCGCGTAC GTCGTGGCGG TGTTCTTCCT GTGCGCCACC
GCGTTCGCGT TCTTCCAGGT GCCGTTCAAC GCGTTACCCG CCGAACTCAC CGACGGCTAC
CACGAACGCA CCAGGTTGAC GACGTGGCGC ATCGCCGTAC TGGCGTTGGC CATCCTCACC
TCCGGGGCGG TGGCCCCGGC CATCGTGAAC GGCATCGGAG GCGTGGCCGG TTACCGGGCC
ATGGGGCTGT TCGTGGCCGC GCTCATCGTG GTGGGGACCG TGTCGGTGGT CCTAAGCGTC
CGGGGAGTGC GGATCGGTCG CCCCAAACAA CCCACTCCGA CATGGCGGGA ACTGCTGGCC
ACGATGCGCC GGTGGCGGTC GTTCCGGCTG TTGCTCGGCG TGTACTTCGT CCAGGCGCTC
GGGGTGGCCA CCCTGCTCGC CGGTGTCAGT TACGTCGCCC GCTACGTCCT GGGCGACGCT
GACCTGCAAC CGCTGCTGTT CGCCGGGTTC ATCGGACCGG CCCTGTTGGT GATGCCGCTG
TGGGACCGCG TGGGACGGTC GGGAGGCAAG TTGACGGGGT TTCGGATCGC GACGGTGGCG
CTCGCGGCGG CGTTGGTCGG TCTGGCGTTC GCACGAGTGT TGCCGTCCGT CGCGGTGTTC
GCCCTCGTCG CGTTGGCGGG GGTGGGGTAT GCGGGCATCC AGGTGTTCCC CCTGGCACTG
CTGCCGGATC TGATCACCGA GGAGGAGCGC CGTACCGGTG AGGCCAGGGC CGGGGTGACG
GCCGGGGTGT GGACGGCGGC CGAGGCGCTC GGGCTGGCGT TGGGGCCGAG CCTGTTCGGA
CTGATGCTGT CGCTCGGCGG CTATGTGTCC GGTACCGACG CGATGTCGGC CACGCAGCCG
GAGAGCGCCG TTTTGGCCAT CACGTTCGGC TTCTCGGTCG TGCCCGCCGT GCTGGTGGTG
CTGGGGTTGC CGCTGCTGCG GCGCAGACTG TTCGGTTCCG AGCGTGCGCG CGGAACCGGG
ATGGACGGGG AGACGGATAC CGAGCAGGTG ATCGGGGCAT GA
|
|---|
| Protein sequence | MSALGTRTRL GYSLGSFVTG AFGTVPGLLL LPYLTDTLAV PAAAAGAIVL LPKAWDVVFN
PVAGRLSDAD LVRRGSRVRS LVVGGLALAV TFAALFAYPG FGSVGADSAY VVAVFFLCAT
AFAFFQVPFN ALPAELTDGY HERTRLTTWR IAVLALAILT SGAVAPAIVN GIGGVAGYRA
MGLFVAALIV VGTVSVVLSV RGVRIGRPKQ PTPTWRELLA TMRRWRSFRL LLGVYFVQAL
GVATLLAGVS YVARYVLGDA DLQPLLFAGF IGPALLVMPL WDRVGRSGGK LTGFRIATVA
LAAALVGLAF ARVLPSVAVF ALVALAGVGY AGIQVFPLAL LPDLITEEER RTGEARAGVT
AGVWTAAEAL GLALGPSLFG LMLSLGGYVS GTDAMSATQP ESAVLAITFG FSVVPAVLVV
LGLPLLRRRL FGSERARGTG MDGETDTEQV IGA
|
|---|
| |