| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22660 |
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| Symbol | |
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| ID | 8387590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2437027 |
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| End bp | 2438478 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976319 |
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| Product | PLP-dependent enzyme, glutamate decarboxylase |
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| Protein accession | YP_003134101 |
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| Protein GI | 257056269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCG AGGACGTTCT GGCCCGGGTT CGTGCGTTGC GCGCCGATGA CGCCCCCACC
CACGGCGGGC GGACACTCGC CTACGTCTAC GACAGTGGGT TGGCCGAGCT GGACGAGTTG
GGGGCACGGG CGCACGCGTT GGCGTCGTCG GCGAACGCGC TCGACCCCAC CACGTTCCCC
GGGCTGCTGC GCATGGAGAA CGATCTCGTG GCCACGACCG CGGCGTTGCT CGGCGGTACC
GATGAGACGG TCGGGACGGT CACCTCGGGG GGTACCGAGT CGTGCCTGCT GGCCGTGCTC
GCGGCCAGAC AAGGCCGTCC GGACGTCGCC GATCCGGCAC TGGTCGTGCC CACCACCGTG
CACGCGGCGT TCCGTAAGGC CGCCCACTAC TTCGGACTGC GGCTCGTGGA GGTGGAGGTC
GACCCGGTCA CCTTCCGGGC CGACGCCGCC GCGATGGCGT CGGCGATCGA CGACGACACG
GTGTTGGTGG TGGCCAGTGC GCCCTCGTAC GCGCACGGGG TGATCGACCC GATCCCCGAG
ATCGCGGCCG CGGCCGCCGC GCGGGGGGTT CGGATGCATG TCGACGCCTG CATCGGCGGT
TGGGTGCTGC CGTATCTTCG CAGGCTCGGT GTCGACGGAC CCGCGTTCGA CTTCTCGGTC
GAGGGGGTCA CGAGCATCTC GGTGGATCTG CACAAATACG CCTACTGCCC CAAAGGCACG
TCGGTGTTGT TGTTCGCGAA CGCCGAGGCC CGCCGTGGTC ACTATTTCGG TTGTGCCGAC
TGGCCCGGCT ACACGATGTT GAACACCACG TTGCAGTCGA CCCGCTCGGG CGGCCCGCTC
GCCGCGGCCT GGGCCGTCGT GACGCACCTG GGCGAGGACG GTTATCTGCG GCTCGCCCGG
GAGACGCTCT TCGCCGTGCG GGAGATCAGG CATGGGATCG AGTCGATCGA AGGACTGCGG
ATCCTCGGGG AGCCCGATTC CACGTTGTTG GCCGTGGCCA CGCGGGGCAC GCCCGAGGAG
GTCGGTTTCG ACCTGTTCAC CGTGGCCGAC GAGATGCGTG ATCGGGGCTG GTACGTCCAA
CCGCAGTTCG CGCACGGGCA TTCGCCGGTG AATCTGCATC TGACCGTGAC GGCCGCCAAT
CGGGGGTCGG AGCAGGAGTT CGTCGTCGAC CTGCGGGACT CGGTGGAGGC CGCGTGCGCG
GCGGGGCCCG TGTCGGTGGA CCCGTCGTTG CGGGAGTTCC TTCTCACCCT CGATCCCGAC
CGGCTCACCC CGGAACAGTT CGCCGGACTG CTCGCGGGGG CCGGTCTGGC GCCGGGTGAG
GGGGAGGGCA CCGGGCTGCC GAAGCGGATG GCGTCGATCA ACGCACTGCT CGACGCGGCA
CCCGCCCGAC TGCGGGAACG GGTGTTGCTG GAGTTCCTAG CCCTGCTCTA CCGACCGACT
CCGAGCGCAT GA
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| Protein sequence | MSIEDVLARV RALRADDAPT HGGRTLAYVY DSGLAELDEL GARAHALASS ANALDPTTFP
GLLRMENDLV ATTAALLGGT DETVGTVTSG GTESCLLAVL AARQGRPDVA DPALVVPTTV
HAAFRKAAHY FGLRLVEVEV DPVTFRADAA AMASAIDDDT VLVVASAPSY AHGVIDPIPE
IAAAAAARGV RMHVDACIGG WVLPYLRRLG VDGPAFDFSV EGVTSISVDL HKYAYCPKGT
SVLLFANAEA RRGHYFGCAD WPGYTMLNTT LQSTRSGGPL AAAWAVVTHL GEDGYLRLAR
ETLFAVREIR HGIESIEGLR ILGEPDSTLL AVATRGTPEE VGFDLFTVAD EMRDRGWYVQ
PQFAHGHSPV NLHLTVTAAN RGSEQEFVVD LRDSVEAACA AGPVSVDPSL REFLLTLDPD
RLTPEQFAGL LAGAGLAPGE GEGTGLPKRM ASINALLDAA PARLRERVLL EFLALLYRPT
PSA
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