Gene Svir_22590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22590 
Symbol 
ID8387583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2430522 
End bp2430980 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content68% 
IMG OID644976312 
ProductFHA domain-containing protein 
Protein accessionYP_003134094 
Protein GI257056262 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.781297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGA ACGACGGGCC CGGCGTTCCC CCGGAGCAGT CTCCGGAGCG GACCTCCGTT 
TTCCGGGCCG ACTTTCTGTC GGAGGCAGAG AGCCAGGAGA CGCCCGCGGT GGAGCCGCAG
GACGCTGGCG TCGACGCGTT GCCGGCGGGC TCCGCACTGC TGGTGGTCAA GAGGGGGCCG
AACGCGGGCT CTCGATTCCT GCTCGACCGT GACACGACGA GCGCGGGCCG TCACCCGGAC
AGCGACATCT TCCTCGATGA CGTCACCGTG TCCCGGCGTC ACGCGGAGTT TAGGCGTGAG
GGTGGTGAGT TCGTGGTGAT TGACGTGGGC AGCCTCAACG GCACCTATGT GAACCGCGAG
CCGGTCGACC AGGCCATCCT GAGCAATGGC GACGAGGTGC AGATCGGTAA GTTCCGCCTC
GTGTTCCTGA CCGGTCCCGG GGGTCAGGGG GTCCGGTGA
 
Protein sequence
MSTNDGPGVP PEQSPERTSV FRADFLSEAE SQETPAVEPQ DAGVDALPAG SALLVVKRGP 
NAGSRFLLDR DTTSAGRHPD SDIFLDDVTV SRRHAEFRRE GGEFVVIDVG SLNGTYVNRE
PVDQAILSNG DEVQIGKFRL VFLTGPGGQG VR