Gene Svir_22570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22570 
Symbol 
ID8387581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2429046 
End bp2429519 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID644976310 
Producthypothetical protein 
Protein accessionYP_003134092 
Protein GI257056260 
COG category[S] Function unknown 
COG ID[COG1259] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.309185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TGCGCGTCGT CGGCGTCCGG GTCGAGTTGC CCGCGAATCA GCCAATCTTG 
CTGCTGCGGG AAACCGACGG CGAAAGGTAT CTGCCGATCT GGATCGGCTC GGTGGAGGCA
ACGGCCATCG CGTTGGAACA GCAGGGCGTT CGTCCCGCCC GCCCATTGAC CCATGACCTG
CTCAAGGACA TCATCAGCGC GCTGGGCCGA GAGCTTCAGC AAGTCGTCAT CACCGACCTG
AACGAAGGCA CGTTCTTCGC CGAGCTGGTG TTCGACGGCG GCGTCCGAGT TTCGGCGCGG
CCGAGTGACT CGGTGGCCCT CGCGCTGCGG GCCGGAGTAC CCATCCATGC CGAGGACTCG
GTGCTGGAGG AGGCCGGCCT GATCATTCCG GACGAGCAGG AGGACGAAGT CGAGAAATTC
CGTGAGTTCC TCGACTCCGT CTCTCCGGAA GATTTCCGGG GTGCCGACAC CTGA
 
Protein sequence
MSEMRVVGVR VELPANQPIL LLRETDGERY LPIWIGSVEA TAIALEQQGV RPARPLTHDL 
LKDIISALGR ELQQVVITDL NEGTFFAELV FDGGVRVSAR PSDSVALALR AGVPIHAEDS
VLEEAGLIIP DEQEDEVEKF REFLDSVSPE DFRGADT