Gene Svir_22540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22540 
Symbol 
ID8387578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2426858 
End bp2427532 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID644976307 
Producthypothetical protein 
Protein accessionYP_003134089 
Protein GI257056257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.149113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGAC GCCACAGAGC CCGTCACCGC ACCGGGCGGC ACTACGCCAC CATGACTTCC 
GTTACCGGAA CCCACCGGGC CGTCGGCAAG CGTCGAGGCA TCGCGGCATG GCCGATCGTC
TGCGTCGTCC TGGTGGCGTT CCTCGTCGCC GGCTGGTTCG GCTGGCACTG GGCCGACGGC
GTTCTGGAAA GCCGTGCCGC CGCACAAGCG GCCGACTGCA AGCAAGGTGA CCTCCCCCTC
CGCGTCACCG TCGACCCCGC GCTGGAAGAG CCTGTGATGG CCGCCGCGTC CCGGTGGAAC
GAAGAGCGCA CCGTCGTACG GGAACACTGC GTCCGCGTCG TCGTCCACAC GGCCTCACCG
GACGACGTCT ATGCCGTGCT CACCGACGAC GCCGATCCCA CCACCATCGG CGGCTCCCCA
GCAGCATGGC TGCCGGACTC CACCGAGTGG GTCGAAAAAC TCGCCCGGGA TCGCCCTGAA
CTCGTGGGGT CCTCCGGGCT GTCACTCGCC TCGGGCCCCG ACGGCGATTA CCCGTTCCTC
GTTATCGCGG GCGATGACGC GACCGGCGCC CAACAACACG CCGCGCAGTC ATTTCAGAAG
TACCTGCTCC AACCTGAGCA GCAAGCCCAA TTCCGCAAGG CCGGTTTGAC ACCGGCTCAC
GCCTCCAACG GCTGA
 
Protein sequence
MGRRHRARHR TGRHYATMTS VTGTHRAVGK RRGIAAWPIV CVVLVAFLVA GWFGWHWADG 
VLESRAAAQA ADCKQGDLPL RVTVDPALEE PVMAAASRWN EERTVVREHC VRVVVHTASP
DDVYAVLTDD ADPTTIGGSP AAWLPDSTEW VEKLARDRPE LVGSSGLSLA SGPDGDYPFL
VIAGDDATGA QQHAAQSFQK YLLQPEQQAQ FRKAGLTPAH ASNG