Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22540 |
Symbol | |
ID | 8387578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2426858 |
End bp | 2427532 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976307 |
Product | hypothetical protein |
Protein accession | YP_003134089 |
Protein GI | 257056257 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.149113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCCGAC GCCACAGAGC CCGTCACCGC ACCGGGCGGC ACTACGCCAC CATGACTTCC GTTACCGGAA CCCACCGGGC CGTCGGCAAG CGTCGAGGCA TCGCGGCATG GCCGATCGTC TGCGTCGTCC TGGTGGCGTT CCTCGTCGCC GGCTGGTTCG GCTGGCACTG GGCCGACGGC GTTCTGGAAA GCCGTGCCGC CGCACAAGCG GCCGACTGCA AGCAAGGTGA CCTCCCCCTC CGCGTCACCG TCGACCCCGC GCTGGAAGAG CCTGTGATGG CCGCCGCGTC CCGGTGGAAC GAAGAGCGCA CCGTCGTACG GGAACACTGC GTCCGCGTCG TCGTCCACAC GGCCTCACCG GACGACGTCT ATGCCGTGCT CACCGACGAC GCCGATCCCA CCACCATCGG CGGCTCCCCA GCAGCATGGC TGCCGGACTC CACCGAGTGG GTCGAAAAAC TCGCCCGGGA TCGCCCTGAA CTCGTGGGGT CCTCCGGGCT GTCACTCGCC TCGGGCCCCG ACGGCGATTA CCCGTTCCTC GTTATCGCGG GCGATGACGC GACCGGCGCC CAACAACACG CCGCGCAGTC ATTTCAGAAG TACCTGCTCC AACCTGAGCA GCAAGCCCAA TTCCGCAAGG CCGGTTTGAC ACCGGCTCAC GCCTCCAACG GCTGA
|
Protein sequence | MGRRHRARHR TGRHYATMTS VTGTHRAVGK RRGIAAWPIV CVVLVAFLVA GWFGWHWADG VLESRAAAQA ADCKQGDLPL RVTVDPALEE PVMAAASRWN EERTVVREHC VRVVVHTASP DDVYAVLTDD ADPTTIGGSP AAWLPDSTEW VEKLARDRPE LVGSSGLSLA SGPDGDYPFL VIAGDDATGA QQHAAQSFQK YLLQPEQQAQ FRKAGLTPAH ASNG
|
| |