Gene Svir_22510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22510 
Symbol 
ID8387575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2423497 
End bp2424813 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content66% 
IMG OID644976304 
ProductCBS domain-containing protein 
Protein accessionYP_003134086 
Protein GI257056254 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0516538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.801852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC TGCTCAACGT TCTCGGCGTC CTCTTCGTCA TCCTGCTCAC CGTCGGAACC 
GGTTTGGCCG TCGCTGCCGA GTTCTCGTTG ACGACGCTGG AACGCAGCAC GGTCGAGTCG
AATGTCCGAC AGGTCGGTGA CAAGCGGTCC AAGGCCGTTC TCAAGGCGCA CCGCACGCTG
TCGTTCCAAC TCTCCGGCGC GCAGGTGGCC ATCACACTCA CCACCCTGGT CACCGGGTAC
GTCGCCGAGC CTCTGCTCGG TCGCTTCGTC CGACCCGCCC TGATGGCGCT GGGCATGTCG
GAATCCAGCG CGGCCGGAAC CTCGCTCGTG GTGGCCATGC TGCTGGCCAC GTCCCTGTCG
ATGGTGATCG GCGAGATGGT GCCGAAGAAT CTGGCGGTGG CCGAGCCGCT GCGCACGGCA
CGTGCCGTGG CCGGCTACCA CACCCGGTTC TCGGCCCTGT TCCGCTGGCT CATCAACCTC
ATGAACGACA GCGCCAACTG GGTGGTGCGT AAGTTCGGTG TCGAGCCCCA GGAGGAGCTG
CGCTCGGCAC GGTCCCCACA GGAACTCGGC TCCATCGTCC GGGCGAGCGC CGAAACGGGG
ACGCTCGACG TGTCGACGGC CAGACTGCTC GACCGTTCCC TACGGTTCGG CGACCGCACC
GCGGGCGAGT TGATGACTCC CCGGGTACGA CTGGAAGCGT TGCATGTCGA CGACACCGTC
GCGGACATGG TGGCGCTCGC GCGCCGCACC GGTTTCTCCC GTTTCCCCGT CTACCGCGAG
GACCTCGACG ACATCCAAGG CACCGTGCAC GTCAAGCAGG CGTTCACCGT TGCAAGCTCC
GAACGCGGCT CCACTCCCGT GGGCTCGCTG ATGCGGCCGA TGCCGACCGT GCCCGAATCC
CTGCCCGGTG ACACCGTTTT GGACCGGCTT CGCGATTCCC GCTTCCAGCT TGCGATCGTG
GTCGACGAGT ACGGCGGGAC CGCGGGCCTG GTGACGTTGG AGGACGTGGT CGAGGAGATC
GTGGGCGACG TACGCGACGA ACACGACACC CGTGAGAAAC CCGCTTCTCA ACAACTGGGC
CCCGACAGCT GGGTCGTGTC GGGACAGCTT CGCGGGGACG AGGTGTTCGA CGCCACGGGC
TTCCACATGC CCGATGGCGA CTACGAAACG ATCGCCGGGC TGCTGTTGGA CCGACTCGGT
GAGATCCCCG AGATCGGCAT GTCCTTGGAC ATCGACGGCT GGCGACTGGT GGTGACCGGC
ATGGACCGAC ACCGCATCTC CGAGGTCACC GTGCAACGGC AGGGGGCGGT CTCGTGA
 
Protein sequence
MDILLNVLGV LFVILLTVGT GLAVAAEFSL TTLERSTVES NVRQVGDKRS KAVLKAHRTL 
SFQLSGAQVA ITLTTLVTGY VAEPLLGRFV RPALMALGMS ESSAAGTSLV VAMLLATSLS
MVIGEMVPKN LAVAEPLRTA RAVAGYHTRF SALFRWLINL MNDSANWVVR KFGVEPQEEL
RSARSPQELG SIVRASAETG TLDVSTARLL DRSLRFGDRT AGELMTPRVR LEALHVDDTV
ADMVALARRT GFSRFPVYRE DLDDIQGTVH VKQAFTVASS ERGSTPVGSL MRPMPTVPES
LPGDTVLDRL RDSRFQLAIV VDEYGGTAGL VTLEDVVEEI VGDVRDEHDT REKPASQQLG
PDSWVVSGQL RGDEVFDATG FHMPDGDYET IAGLLLDRLG EIPEIGMSLD IDGWRLVVTG
MDRHRISEVT VQRQGAVS