Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22510 |
Symbol | |
ID | 8387575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2423497 |
End bp | 2424813 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976304 |
Product | CBS domain-containing protein |
Protein accession | YP_003134086 |
Protein GI | 257056254 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0516538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.801852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCC TGCTCAACGT TCTCGGCGTC CTCTTCGTCA TCCTGCTCAC CGTCGGAACC GGTTTGGCCG TCGCTGCCGA GTTCTCGTTG ACGACGCTGG AACGCAGCAC GGTCGAGTCG AATGTCCGAC AGGTCGGTGA CAAGCGGTCC AAGGCCGTTC TCAAGGCGCA CCGCACGCTG TCGTTCCAAC TCTCCGGCGC GCAGGTGGCC ATCACACTCA CCACCCTGGT CACCGGGTAC GTCGCCGAGC CTCTGCTCGG TCGCTTCGTC CGACCCGCCC TGATGGCGCT GGGCATGTCG GAATCCAGCG CGGCCGGAAC CTCGCTCGTG GTGGCCATGC TGCTGGCCAC GTCCCTGTCG ATGGTGATCG GCGAGATGGT GCCGAAGAAT CTGGCGGTGG CCGAGCCGCT GCGCACGGCA CGTGCCGTGG CCGGCTACCA CACCCGGTTC TCGGCCCTGT TCCGCTGGCT CATCAACCTC ATGAACGACA GCGCCAACTG GGTGGTGCGT AAGTTCGGTG TCGAGCCCCA GGAGGAGCTG CGCTCGGCAC GGTCCCCACA GGAACTCGGC TCCATCGTCC GGGCGAGCGC CGAAACGGGG ACGCTCGACG TGTCGACGGC CAGACTGCTC GACCGTTCCC TACGGTTCGG CGACCGCACC GCGGGCGAGT TGATGACTCC CCGGGTACGA CTGGAAGCGT TGCATGTCGA CGACACCGTC GCGGACATGG TGGCGCTCGC GCGCCGCACC GGTTTCTCCC GTTTCCCCGT CTACCGCGAG GACCTCGACG ACATCCAAGG CACCGTGCAC GTCAAGCAGG CGTTCACCGT TGCAAGCTCC GAACGCGGCT CCACTCCCGT GGGCTCGCTG ATGCGGCCGA TGCCGACCGT GCCCGAATCC CTGCCCGGTG ACACCGTTTT GGACCGGCTT CGCGATTCCC GCTTCCAGCT TGCGATCGTG GTCGACGAGT ACGGCGGGAC CGCGGGCCTG GTGACGTTGG AGGACGTGGT CGAGGAGATC GTGGGCGACG TACGCGACGA ACACGACACC CGTGAGAAAC CCGCTTCTCA ACAACTGGGC CCCGACAGCT GGGTCGTGTC GGGACAGCTT CGCGGGGACG AGGTGTTCGA CGCCACGGGC TTCCACATGC CCGATGGCGA CTACGAAACG ATCGCCGGGC TGCTGTTGGA CCGACTCGGT GAGATCCCCG AGATCGGCAT GTCCTTGGAC ATCGACGGCT GGCGACTGGT GGTGACCGGC ATGGACCGAC ACCGCATCTC CGAGGTCACC GTGCAACGGC AGGGGGCGGT CTCGTGA
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Protein sequence | MDILLNVLGV LFVILLTVGT GLAVAAEFSL TTLERSTVES NVRQVGDKRS KAVLKAHRTL SFQLSGAQVA ITLTTLVTGY VAEPLLGRFV RPALMALGMS ESSAAGTSLV VAMLLATSLS MVIGEMVPKN LAVAEPLRTA RAVAGYHTRF SALFRWLINL MNDSANWVVR KFGVEPQEEL RSARSPQELG SIVRASAETG TLDVSTARLL DRSLRFGDRT AGELMTPRVR LEALHVDDTV ADMVALARRT GFSRFPVYRE DLDDIQGTVH VKQAFTVASS ERGSTPVGSL MRPMPTVPES LPGDTVLDRL RDSRFQLAIV VDEYGGTAGL VTLEDVVEEI VGDVRDEHDT REKPASQQLG PDSWVVSGQL RGDEVFDATG FHMPDGDYET IAGLLLDRLG EIPEIGMSLD IDGWRLVVTG MDRHRISEVT VQRQGAVS
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