Gene Svir_22490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22490 
Symbol 
ID8387573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2421326 
End bp2422507 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content70% 
IMG OID644976302 
Productglutamate dehydrogenase/leucine dehydrogenase 
Protein accessionYP_003134084 
Protein GI257056252 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCAGC ATGCCAACGA ACCATTGCTA CGGCTGACGT GGACTGACAG GGTGACGGGC 
GCCCAAGGCC ATCTCGTCGT TCACACCCTC GTGTCCGACA TGGCGACCGG CGGCACCCGG
ATGCGGCCGG GCTGCACGCT CTCGGAGGTC GAGGACCTCG CCCGGGGGAT GGCGGCCAAG
ACGGCCACGT TCGACCTCCC CGTGGGAGGC GCCAAGGGCG GCATCGACTT CGACCCGAAG
GACCCCCGGG CTCGAGGAGT GCTCGAGCGC TTCTGCCGTG CCATGCGGCC ATGGCTGGAG
GCGCACTGGG TGACAGCCGA GGACCTCGGC GTACCGCAGC ACCTCATCGA CGAGGTGTTC
GCCGGCCTGA ACCTGCGTCA GTCGTATCAC GCGGCCATCC GACGCTCCCC GGACCCCGAG
CGCACACTGC GACGCGTGCA CGCGGGGCTT AGCGCCCCGG TCCCGGGTGG GTTGCTGCTG
GGCGACGTCA TCGGCGGATA CGGCGTCGCG CAGGCGTGTC TCGGGGTGGT GTCAGCGTGG
AACTGGACAC CCGCCGACAC CACCGTGGCC ATTCAGGGCA TCGGGACGAT GGGCGGCGGC
GCGGCCTGGT ACCTGCACGA GTCCGGGGCG CGGATCGTCG CCGTCGCCGA CGCCGCGGGG
ACCTTGTCCG ATCCGGCGGG ACTCGACATC CCGGCGCTGT TGCGGGCCCG CGATCGCTAC
GGCGAGATCG ACCGCGCGCA GGTGCCCGAC CACGTCGAGC GGCTGCCCCG TTCGGCCGTG
CTCGCCGCCG ACGCCGACAT CCTCGTCCCC GCCGCCGTCT CGTATGCGCT GACGCCGGAC
AACTCCTACG ACATCAACGC CAGTGCCATC GTCGAGGCGG CCAACGCGGC GACGACACCC
GAGGCCGAGG CGATGTTGAC CGCACGCGGT ATCCCGATCA TCCCGGACTT CGTGGCCAAC
GCGGGCGCGG TCGCGTGGGT CTGGTGGTTG CTACAGGGGC AGGTCGGTGC CAATCCCGCG
GACTCGTTCC TCAAACTGCG CGCCGAGATG CAGGCCAAGG TGGCGTTGTT GCTCTCCGCC
TGGAACAGTG ACCGGGTCCC ACCGAGGCGG ACCGCGCAGC GATTCGTAGC CGCTCGTGAA
CTCACCGCAT CCACACCCGA ACGGGTACTG ACGATTCCGT GA
 
Protein sequence
MNQHANEPLL RLTWTDRVTG AQGHLVVHTL VSDMATGGTR MRPGCTLSEV EDLARGMAAK 
TATFDLPVGG AKGGIDFDPK DPRARGVLER FCRAMRPWLE AHWVTAEDLG VPQHLIDEVF
AGLNLRQSYH AAIRRSPDPE RTLRRVHAGL SAPVPGGLLL GDVIGGYGVA QACLGVVSAW
NWTPADTTVA IQGIGTMGGG AAWYLHESGA RIVAVADAAG TLSDPAGLDI PALLRARDRY
GEIDRAQVPD HVERLPRSAV LAADADILVP AAVSYALTPD NSYDINASAI VEAANAATTP
EAEAMLTARG IPIIPDFVAN AGAVAWVWWL LQGQVGANPA DSFLKLRAEM QAKVALLLSA
WNSDRVPPRR TAQRFVAARE LTASTPERVL TIP