Gene Svir_22440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22440 
Symbol 
ID8387568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2415728 
End bp2416702 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content67% 
IMG OID644976297 
Productprobable methyltransferase 
Protein accessionYP_003134079 
Protein GI257056247 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.453934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.739061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG CGCGGATCGA CGTCCACCGG GACCCGACCC GGATGCTGGA GACACTGCGA 
GAGGACGTGC GCGAGGGACT GTCCGCGCGG GCCAAGTGGC TGCCGTCCAA ATGGTTCTAC
GACGCGCGCG GCAGTGAGCT GTTCGAACAC ATCACGAGGC TGCCCGAGTA CTACCCCACC
CGTGTCGAGC GGGACATCCT GCGCGCCCGC GCGGGGGAGG TCGCCGACGT CACCGAGGCC
CGCACCATCG TGGAACTGGG TTCGGGGTCG AGCGAGAAGA CCCGCCTGTT GCTCGACGCC
TTCGCGGCAC GGGGGAGGTT GTCCGAATTC GTCCCGTTGG ACGTCTCGGA AGCCGCGTTG
GCCGCTTCCG CCGAGGCCAT CGTCGCGGAC TACCCGGGGC TGCGGGTGCA CGGTGTGGTG
GCCGATTTCA CCGAGCCATT GGAGTCCTTG CCCGGCACAC CACCACGGAT GGTGATCTTC
CTCGGCGGCA CCGTCGGCAA CTTCCCGCCC GGGGAGCGAG CGAAGTTCTT GGCCTCGATA
CGGTCGGCGC TCACCGACGG CGAGTGGTTC CTGCTCGGCA CTGATCTGAT CAAAGACGTC
GACACGCTCG TACGAGCCTA CGACGACGCT GCGGGCGTGA CGGCGGAGTT CAACCGCAAT
GTGTTACGGG TGATCAATGA CCGGCTCGGC GCCGGTTTCG AGCCGGAGGA GTTCGAACAC
GTCGCCCGCT GGGACGATCG CAACGAATGG ATCGAGATGC GCCTACGGGC GCGTCGTGGG
CTGACGGTGA ACGTGCCCGG AGCCGACCTG ACGGTGACGT TCGCCGAGGG GGAGGAGTTG
CGCACGGAGA TCTCCGCCAA ATTCCGCCCC GAGGGGGTGC GGGCCGAATT GGCCGAGGCC
GGTTTCACGT TACGGCGTTG GTGGACCGAT CCCGCAGGGC TGTTCGGGGT GTCGTTGGCT
CAGGCGCGGG ACTGA
 
Protein sequence
MSEARIDVHR DPTRMLETLR EDVREGLSAR AKWLPSKWFY DARGSELFEH ITRLPEYYPT 
RVERDILRAR AGEVADVTEA RTIVELGSGS SEKTRLLLDA FAARGRLSEF VPLDVSEAAL
AASAEAIVAD YPGLRVHGVV ADFTEPLESL PGTPPRMVIF LGGTVGNFPP GERAKFLASI
RSALTDGEWF LLGTDLIKDV DTLVRAYDDA AGVTAEFNRN VLRVINDRLG AGFEPEEFEH
VARWDDRNEW IEMRLRARRG LTVNVPGADL TVTFAEGEEL RTEISAKFRP EGVRAELAEA
GFTLRRWWTD PAGLFGVSLA QARD