| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22360 |
|---|
| Symbol | |
|---|
| ID | 8387560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2405413 |
|---|
| End bp | 2406393 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976289 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003134071 |
|---|
| Protein GI | 257056239 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1240] Mg-chelatase subunit ChlD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0925694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.626592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGT CGGGTTTCAG TTCACCGTGG TGGTTCCTAC TGCTCGCCGT GGTGGCGGCA
CTCGTGGCGG GTTACGTGGT CGCGCTGCGC TCACGTCGCA AGCGCATCAT GAAGTTCACC
AATCTGGAGC TGCTCGAACG CGTCGCGCCG CGCAGTCAGA GCCGGCTGCG GCATGTGCCC
GCCGCGTTGC TCGTGGTGTC GTTGTTGCTG CTGATCTTCG CGCTCGCGGG GCCGACCGCC
GAGCAGAAGG TGCCGCGCAA TCGGGCCACG GTGATGCTCG TGATCGACGT CTCCTTGTCG
ATGGAGGCCA CCGACGTCAA GCCCACACGG TTGCGGGCCG CGCAGGACGC CGCGCGCTCG
TTCGCCGAGG GGCTCACCCC GGGGGTGAAC CTGGGGCTCA TCTCGTTCGC CGGTACGGCC
ACCGTCTTGG CCGCCCCCAC CACCGAACGC GAGGGTGTGG TGCACGCGAT CGAGAACCTC
AAACTCGCGC AGTCCACGGC CACCGGAGAG GGGATCTTCG CCGCTCTTCA GGCCATCGAG
AGTTTCTCAG CCGTGATCGG GGGCGCGGAA GGCCCTCCGC CTGCGCGCAT CGTGCTGATG
ACCGACGGTA AACAGACCGT CCCCCAGGAT GAGTACGCGC CGCGCGGTGC TTTCACCGCG
GCCGGGGTGG CCAAGCAGAA GGGCATCCCC ATCACCACGA TCTCGTTCGG CACGTCGTAC
GGCAGTGTGG AGATCGACGG TACGCGGGTG CCCGTGGAGG TGGACGACGC CTCCATGCGG
GAGATCGCCC GACTGTCCGG TGGCGACTTC TACAAGGCGG CCACCGCCGA GGAACTGAAG
CAGGTGTACG ACAGCCTGGG TGAGCAGATC GGCTACGAGA TCAAGGAGAC CGACGCCAGT
AAGCCGTGGG TGATGCTGGG CACCATCACC CTCATCGGTG CGGCCGTCGG TTCGCTGTTG
ATCGGGCAGC GGCTCCCGTA A
|
|---|
| Protein sequence | MSVSGFSSPW WFLLLAVVAA LVAGYVVALR SRRKRIMKFT NLELLERVAP RSQSRLRHVP
AALLVVSLLL LIFALAGPTA EQKVPRNRAT VMLVIDVSLS MEATDVKPTR LRAAQDAARS
FAEGLTPGVN LGLISFAGTA TVLAAPTTER EGVVHAIENL KLAQSTATGE GIFAALQAIE
SFSAVIGGAE GPPPARIVLM TDGKQTVPQD EYAPRGAFTA AGVAKQKGIP ITTISFGTSY
GSVEIDGTRV PVEVDDASMR EIARLSGGDF YKAATAEELK QVYDSLGEQI GYEIKETDAS
KPWVMLGTIT LIGAAVGSLL IGQRLP
|
|---|
| |