Gene Svir_22320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22320 
SymbolhemH 
ID8387556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2402031 
End bp2403083 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID644976285 
Productferrochelatase 
Protein accessionYP_003134067 
Protein GI257056235 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0799784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.237967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTACG ACGCGTTGCT GTGGTTGTCG TTCGGGGGTC CTGAAGGTCC GGACGACGTG 
ATGCCGTTCC TGGAGAACGT CACCAGGGGT AGGGGAGTCC CGCCGGAGCG CCTCGCCGAG
GTCGCCGAGC ACTATCACCA CTTCGGTGGG GTGTCGCCGA TCAACCGACT GAACCGGGAG
GCGATCGCGG CCGTCGAGAG TGAGCTGGCC GCGCAGAACA TCGACCTGCC CGTGTATTTC
GGTAACCGAA ACTGGCATCC CATGGTGGAG GACACCGTGG CGCGGATGGC CGCCGACGGT
GTACGGCGTG CTCTGGTGTT CTCCACCAGC GCCTACGGCG GGTACTCGGC ATGTCGACAG
TACGACGAGG ACATCCGCCG GGCGCGCGCC GCTGTCGGGG ACGGGGCGCC CCAGTTGGTC
AAGCTGCGCC AGTTCTTCGA CCACCCCCTG TTCATCGCCG CTTTCGCCGA CGGGGTCCGG
AAGGCCTACG AGCAGATGGG CGATCCCACC GCCCGACTCG TATTCGTCGC GCATTCGGTA
CCGACCGCAG CGGACGCCGC GTCCGGACCT CCGGAGGAAG GCGGGCACCG CTACTCCCGT
CAGGTCGCCG AGGCGTCCCG ACTGGTGGCG GCCGAGGTCG GCGTCGACAC CTACGACGTC
GTGTGGCAGT CCCGTTCGGG GCCACCACAG GTGCCGTGGT TGGAGCCGGA CATCGTGGAC
CACATCGACG CGTTGCACGA GGCCGGGGTG AAGGCCGTGG TGTGCTGCCC CATCGGTTTC
GTCTCCGACC ACCTGGAAGT GATCTGGGAC CTCGACAACG AGGCCGCCGA ACGCGCAACC
GAGCTGGGCA TGTCCTTCGT CCGCTCCGCG ACGCCCAACT CCGACCCCCG GTTCGCGCAG
CTGCTGGTCG AGCTGATCCG GGAGCAGACC GAGAACGCGC CGGTGCGGAA ACTGTCGGAG
CTCGTCACCG GCGGGGACAC CGCCAACGGG GAGCCCTGCG CCGTCCGATG CTGTGAACCC
GTCCCACGTC CGGCGGTCGC GCAGAACGCC TGA
 
Protein sequence
MDYDALLWLS FGGPEGPDDV MPFLENVTRG RGVPPERLAE VAEHYHHFGG VSPINRLNRE 
AIAAVESELA AQNIDLPVYF GNRNWHPMVE DTVARMAADG VRRALVFSTS AYGGYSACRQ
YDEDIRRARA AVGDGAPQLV KLRQFFDHPL FIAAFADGVR KAYEQMGDPT ARLVFVAHSV
PTAADAASGP PEEGGHRYSR QVAEASRLVA AEVGVDTYDV VWQSRSGPPQ VPWLEPDIVD
HIDALHEAGV KAVVCCPIGF VSDHLEVIWD LDNEAAERAT ELGMSFVRSA TPNSDPRFAQ
LLVELIREQT ENAPVRKLSE LVTGGDTANG EPCAVRCCEP VPRPAVAQNA