Gene Svir_22310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22310 
Symbol 
ID8387555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2401169 
End bp2401978 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content72% 
IMG OID644976284 
Producthypothetical protein 
Protein accessionYP_003134066 
Protein GI257056234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0938212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.213332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTTGTC CCAGTGCGAC CCTCGCCGTG TGGTCCTCGG CCTGGCTGTC GGGGGGCACC 
GCCTCCGACG ACGTCCTCGA CGCCCTGACA GCCTGGGGTG AGGCCCACGA GGTGGTGGCT
CACGACGACG CGATCGCCGA GGTGTTCGAC CTGCCGGTGA CCGGACGAGT CCCGGCCACC
CCGGTGGGAT TGCTGGGCGC GCTGCGCCGC CTGGGCACCC CCGGCGGCCG CCTGGTGTTA
CCCGTGGCGG GTGATGTGCG CGGTCTCGGT GGTGGAGGAC CGCTCACCAC GGCGGCCCTG
CGGGCCGGCG AGGCCCTGGT GTTCCCCGAT CTGGGTTATG CGGTGGTGCC GCAGCCGATC
GCCGAGGGAC TGTTGCGCTG GACGGTGTTC GGCCTGGCGA GCAACCCCGT ACTCGGCACC
CCCGCACCCG AATACGTCCC CCTATCAGAG GCGGAGCACG GGCTCACCGA GACGGTACGA
AACAGCGCGG GGGCCCTGCA GGCCCTCGAC GTGGCACGCG ATCGCCCCGG GGTACGTGCG
GAGCTGTCCG CGGCGCTGCG GACGAAACCT CGACTCGAAT GGCCGAGCGG GATGCCGGGT
CGGGCGTTGC GCGTGTTGCA ACGCGCTGAC GAGGTCGACG CGATCCTCAC CCTCGCCCAG
GCCGACGAAC CCGGGGGTGC GATGTCGGCG TCGGCCGCCG TTCGTCGTGC CGAGGCCCTG
CGACCACTGG GTGACGCGAT CCGACGGGCC CGCTGCGCGG CGATCAACGA GTCCGTGCGG
CTGCTCTCCC AAGCCTCCGA GGCCTCGTAG
 
Protein sequence
MCCPSATLAV WSSAWLSGGT ASDDVLDALT AWGEAHEVVA HDDAIAEVFD LPVTGRVPAT 
PVGLLGALRR LGTPGGRLVL PVAGDVRGLG GGGPLTTAAL RAGEALVFPD LGYAVVPQPI
AEGLLRWTVF GLASNPVLGT PAPEYVPLSE AEHGLTETVR NSAGALQALD VARDRPGVRA
ELSAALRTKP RLEWPSGMPG RALRVLQRAD EVDAILTLAQ ADEPGGAMSA SAAVRRAEAL
RPLGDAIRRA RCAAINESVR LLSQASEAS