Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22250 |
Symbol | |
ID | 8387549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2393451 |
End bp | 2394041 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976278 |
Product | transcriptional regulator |
Protein accession | YP_003134060 |
Protein GI | 257056228 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0446991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.543201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCCACC GAGAAGCTCT CCTCGCGGCC GCGCGGCGGT TGTTGCGAAC CAAGGGATAC GCACACATCA CGGCTCGTGA CCTCGTGGCC GAATCGGGCA CCAACCTGGC CTCCATCGGC TACCACTTCG GTTCGAAGGC CGGGCTGCTC AACGAGGCCA TCGGCGAGGC GATGCAGGAC TGGACCGAAC AACTCGCCCG GATCGCGATG GCCGACCCCG CCGCGTCGAC GGCGGAACGC GGACTTTCGG CATGGTCGGC CATGCTGGAG GGACTGGTCC GCGAGCGGGA ACTTGTGGTG TCGTACCTGG AGGCGTTGGC CCAGGCCGAA CGTGAGCCCG TACTGAGAGA ACAGTTCGCG GAACAGTATC GCCGCTGCCG CGCCCGCGTC GCCGAACTCG TCGCGGAGTC CCTCGGGGAG GGGGCCAGGC CGGACGACCC GTCCGTCAAG GCCGTCGCCA GCTTCGTCAT CGCCGTCTGC GATGGGCTCG CGGTGCAGTG GGTACTCGAC CCCGACGAGC TACCCACCGG CGAGGAACTG CGTAGCGGTG TCAGGACTGT GTGGGATCGC TCGCACCACA CGGAACAGTG A
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Protein sequence | MGHREALLAA ARRLLRTKGY AHITARDLVA ESGTNLASIG YHFGSKAGLL NEAIGEAMQD WTEQLARIAM ADPAASTAER GLSAWSAMLE GLVRERELVV SYLEALAQAE REPVLREQFA EQYRRCRARV AELVAESLGE GARPDDPSVK AVASFVIAVC DGLAVQWVLD PDELPTGEEL RSGVRTVWDR SHHTEQ
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