Gene Svir_22250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22250 
Symbol 
ID8387549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2393451 
End bp2394041 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID644976278 
Producttranscriptional regulator 
Protein accessionYP_003134060 
Protein GI257056228 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0446991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.543201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCACC GAGAAGCTCT CCTCGCGGCC GCGCGGCGGT TGTTGCGAAC CAAGGGATAC 
GCACACATCA CGGCTCGTGA CCTCGTGGCC GAATCGGGCA CCAACCTGGC CTCCATCGGC
TACCACTTCG GTTCGAAGGC CGGGCTGCTC AACGAGGCCA TCGGCGAGGC GATGCAGGAC
TGGACCGAAC AACTCGCCCG GATCGCGATG GCCGACCCCG CCGCGTCGAC GGCGGAACGC
GGACTTTCGG CATGGTCGGC CATGCTGGAG GGACTGGTCC GCGAGCGGGA ACTTGTGGTG
TCGTACCTGG AGGCGTTGGC CCAGGCCGAA CGTGAGCCCG TACTGAGAGA ACAGTTCGCG
GAACAGTATC GCCGCTGCCG CGCCCGCGTC GCCGAACTCG TCGCGGAGTC CCTCGGGGAG
GGGGCCAGGC CGGACGACCC GTCCGTCAAG GCCGTCGCCA GCTTCGTCAT CGCCGTCTGC
GATGGGCTCG CGGTGCAGTG GGTACTCGAC CCCGACGAGC TACCCACCGG CGAGGAACTG
CGTAGCGGTG TCAGGACTGT GTGGGATCGC TCGCACCACA CGGAACAGTG A
 
Protein sequence
MGHREALLAA ARRLLRTKGY AHITARDLVA ESGTNLASIG YHFGSKAGLL NEAIGEAMQD 
WTEQLARIAM ADPAASTAER GLSAWSAMLE GLVRERELVV SYLEALAQAE REPVLREQFA
EQYRRCRARV AELVAESLGE GARPDDPSVK AVASFVIAVC DGLAVQWVLD PDELPTGEEL
RSGVRTVWDR SHHTEQ