| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22080 |
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| Symbol | |
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| ID | 8387532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2376730 |
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| End bp | 2378538 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644976261 |
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| Product | ATP-dependent 26S proteasome regulatory subunit |
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| Protein accession | YP_003134043 |
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| Protein GI | 257056211 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACG ACCTTCCCGG AGGTCGGCAC GACGAGGCCG ACTCTTCAGA GACAGGCGGA
GCCGGAACCA CGGAGAACCC GTCGAGCGAA CAGGCGCGTC AGATCCGTTT CCTCGAGGAA
GAAGTGGCGC TGCTCCGTCG CAAGCTCACC GACTCGCCCC GGCAGAATCG AGTGCTGGAG
CAACGGCTGG CCGAGGCGAA CGAGCGCGTG AGCCAGCTCA CCGAGCGCAA CAACAAGTTG
GTCGAGACTC TGCGTGAGGC GCGGAGCCAG CTGTTGGCGC TGCGGGAGGA GGTCGATCGA
CTCGCGCAAC CTCCGAGTGG CTACGGCGTG TTCATCGCCG CTTACGACGA TAACACGGTG
GATGTGTTCA CCTCGGGCCG CAAGATGCGG GTCGCCGTGT CGCCGACGGT GGACATCCAG
AGTCTGCGGC GGGGGCAGAG CGTCCGACTC AACGAAGCGC TGACCGTGGT GGAGGTCGGC
GGCTTCGAGA GCACGGGTGA GGTCTGCACC CTGCGAGAGG TGTTGGCACC CGACACCGAA
GGCGGTAGTG CCCGCGCGTT GGTGGCGGGG CATACCGACG AGGAACGGGT CGTGTGGCTG
GCCGATCCGC TGGCGGAGCA AACGCTCAAG CCCGGCGACT CGCTCCTGGT GGACCCCAAG
GCGGGCTACG CGTACGAACG TGTGCCCAAG GCCGAGGTCG AGGACTTGGT GCTGGAGGAG
GTGCCCGACG TCCGATACGA GGACATCGGT GGCCTGTACC GGCAGATCGA GCAGATCAGG
GACGCGGTCG AGCTGCCGTT CCTCCACGCT GATCTGTACA CACAGTACAA GTTGAGGCCA
CCGAAGGGGG TGCTCCTCTA CGGGCCGCCG GGATGTGGGA AGACGCTGAT CGCCAAGGCG
GTGGCGAACT CGTTGGCCAA GCAGGTCGCC GCGGCGACGG GGGAGAAGGA CGCCAAGTCC
TACTTCCTCA ACATCAAGGG GCCTGAGCTG CTCAACAAGT TCGTCGGTGA GACCGAACGA
CACATTCGGA TGATTTTCCA GCGGGCACGG GAGAAGGCCT CCGACGGAAC ACCTGTGATC
GTGTTCTTCG ACGAGATGGA GTCGATCTTC CGAACGCGGG GAAGCGGTGT GTCGTCGGAC
GTGGAGACCA CGATCGTGCC CCAGCTGTTG TCGGAGATCG ATGGCGTGGA GGGGCTGGAG
AACGTCATCG TGATCGGTGC TTCGAACCGG GAGGACATGA TCGACCCGGC GATCCTGCGG
CCCGGTCGCC TGGACGTGAA GATCAAGATC GAACGCCCGG ACGCCGAGGG CGCGAAGGAC
ATCTTCTCGA AGTACCTCAC GCCCGATCTG CCGATCCACG CCGATGATCT GGCGGAGTTC
GGTGGCGACC GGCAGGCCAC GATCGACGCG ATGATCCAGC ACACCGTCGA GCGGATGTAC
GAGGAGTCCG AGGAGAACCG GTTCCTGGAA GTCACCTATG CCAACGGTGA CAAGGAAGTG
CTGTACTTCC GCGACTTCAA CTCCGGCGCG ATGATTCAGA ACATCGTGGA CCGGGCGAAG
AAGGCGGCGA TCAAGTCGGT GTTGGAGACC AACCAGCCCG GCTTGCGTGT GCAGCACCTG
CTGGATGCGA TCGTCGACGA GTTCGCGGAG AACGAGGACC TGCCCAACAC CACCAACCCG
GACGACTGGG CACGGATCTC GGGCAAGAAG GGCGAGCGGA TCGTCTACAT CCGCACGCTC
GTGACCGGAA AGAACCAGGA GTCGGGACGG GTGATCGACA CGGCCACCAA TACCGGCCAG
TACCTCTGA
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| Protein sequence | MQHDLPGGRH DEADSSETGG AGTTENPSSE QARQIRFLEE EVALLRRKLT DSPRQNRVLE
QRLAEANERV SQLTERNNKL VETLREARSQ LLALREEVDR LAQPPSGYGV FIAAYDDNTV
DVFTSGRKMR VAVSPTVDIQ SLRRGQSVRL NEALTVVEVG GFESTGEVCT LREVLAPDTE
GGSARALVAG HTDEERVVWL ADPLAEQTLK PGDSLLVDPK AGYAYERVPK AEVEDLVLEE
VPDVRYEDIG GLYRQIEQIR DAVELPFLHA DLYTQYKLRP PKGVLLYGPP GCGKTLIAKA
VANSLAKQVA AATGEKDAKS YFLNIKGPEL LNKFVGETER HIRMIFQRAR EKASDGTPVI
VFFDEMESIF RTRGSGVSSD VETTIVPQLL SEIDGVEGLE NVIVIGASNR EDMIDPAILR
PGRLDVKIKI ERPDAEGAKD IFSKYLTPDL PIHADDLAEF GGDRQATIDA MIQHTVERMY
EESEENRFLE VTYANGDKEV LYFRDFNSGA MIQNIVDRAK KAAIKSVLET NQPGLRVQHL
LDAIVDEFAE NEDLPNTTNP DDWARISGKK GERIVYIRTL VTGKNQESGR VIDTATNTGQ
YL
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