| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22050 |
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| Symbol | |
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| ID | 8387529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2373574 |
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| End bp | 2375076 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976258 |
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| Product | putative proteasome component/protein of unknown function, DUF275 |
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| Protein accession | YP_003134040 |
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| Protein GI | 257056208 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00878282 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGGA TCATGGGAAC CGAGGTGGAG TACGGGATCG CGGTGCCAGG CGACCCGACT
GCGAACCCGG TACTGACGTC CACCCAGGTG GTGTTGGCCT ACGCGGCGGC CGCGGACATT
CCGCGGGCAC GTCGGGCTCG CTGGGATTAC GAAGTGGAGT CACCGTTGCG GGACGCCCGG
GGGTTCGACC TCGGCAGTCC GACGCAGCAG GGACAGGACC CCGATATGGA GGATCTCGGG
GCGGCGAACG TGATCCTCAC CAACGGTGCC CGGCTCTACG TCGATCACGC TCATCCCGAG
TACTCCGCCC CCGAGGTGAC GAACGCCCGG GACGCGGTCA TCTGGGACAA GGCGGGCGAG
CGGGTGATGG AGGAGGCCGC GAGGCGGGCG GCCACCGTGC CGGGACAGGC GCCGGTGCAG
CTTTACAAGA ACAACATCGA CGGCAAGGGC GCCAGTTACG GCACGCACGA GAACTACCTG
ATGAAGCGCT CGACACCGTT CACGGCGGTG ATCGCGGGGC TGACGCCGTT CTTCGTGTCC
CGACAAGTGA TCACCGGATC CGGTCGGGTG GGCATCGGTC AGCAGGGTGA GAAGCCCGGG
TTCCAGCTGT CGCAACGTGC TGACTACATC GAAGTCGAGG TCGGTCTGGA GACCACGCTC
AAACGGGGGA TCATCAACAC GCGCGACGAG CCGCACGCCG ATGCCGACAA GTACCGGCGG
CTGCACGTCA TCATCGGGGA CGCGAACCTG GCGGAGTACG CCACGTATCT GAAGCTGGGC
ACCGCCGCGC TGGTGATCGA CATGATCGAG CACGGGGTGC AGTTCGACGA CCTGAAACTG
GATCAGCCGG TGCGGGCGGT CCATGAGATC AGCCACGACC CGACGCTGAA GACGACCGTG
GAACTCGCCA ACGGGCGCAG GTACACGGCA CTCGATCTGC AGTCCGCTTA CCACGACCTC
GCGACGCAGC ACTTGGAGCG GGTGGGGGCC GACGAGCAGT CGAAGGAGAT CCTGCGGCTG
TGGGGCGAGA CGATCGACGC GCTGGCTCGG GACCCGCAGG AGTGCGCTGA CCGACTCGAC
TGGCCTGCGA AGCTGCGGCT GTTGGAGGCG TATCGGGAGC GGGATTCGCT GGGGTGGTCG
TCGCCGCGGT TGCACATGGT CGACCTGCAG TACTCGGATG TGCGGTTGGA CAAGGGTCTG
TACAACCGAC TGGTGGCGCG TGGATCGATG AAGCGCCTGG TCAGCGAGGA AGAAGTGCAG
GCGGCCATGA CGACTCCGCC GGCGGACACC CGGGCCTACT TCCGCGGCCG GGCGTTGGAG
AAGTACGCGG ACTCGATCGC GGCGGCGTCG TGGGATTCGG TGATCTTCGA CGTGGGTAAG
GAGTCCCTGG TGCGGATTCC GACCCTGGAA CCGCTACGGG GCACCAAGGC GCACGTGGGC
CAATTGCTGG ACGAGGCGGA GACGGCTGAG GAGTTGGTGG AGGCCTTGAC CTCAGCGAAA
TGA
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| Protein sequence | MRRIMGTEVE YGIAVPGDPT ANPVLTSTQV VLAYAAAADI PRARRARWDY EVESPLRDAR
GFDLGSPTQQ GQDPDMEDLG AANVILTNGA RLYVDHAHPE YSAPEVTNAR DAVIWDKAGE
RVMEEAARRA ATVPGQAPVQ LYKNNIDGKG ASYGTHENYL MKRSTPFTAV IAGLTPFFVS
RQVITGSGRV GIGQQGEKPG FQLSQRADYI EVEVGLETTL KRGIINTRDE PHADADKYRR
LHVIIGDANL AEYATYLKLG TAALVIDMIE HGVQFDDLKL DQPVRAVHEI SHDPTLKTTV
ELANGRRYTA LDLQSAYHDL ATQHLERVGA DEQSKEILRL WGETIDALAR DPQECADRLD
WPAKLRLLEA YRERDSLGWS SPRLHMVDLQ YSDVRLDKGL YNRLVARGSM KRLVSEEEVQ
AAMTTPPADT RAYFRGRALE KYADSIAAAS WDSVIFDVGK ESLVRIPTLE PLRGTKAHVG
QLLDEAETAE ELVEALTSAK
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