| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22030 |
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| Symbol | |
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| ID | 8387527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2372305 |
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| End bp | 2373174 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644976256 |
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| Product | proteasome endopeptidase complex, beta component |
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| Protein accession | YP_003134038 |
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| Protein GI | 257056206 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00409578 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACA CGCCGCGAAA CGCGGGCTTC GCGTTGCCCG CCGCGTATAT GTCAACGATG
ACGTCGTCGT TCATCGATTT CCTCAAGGCC GAGGCTCCTG ATCTGTTGCC TCGTGCGCGG
GTGGAGAACA TGCCCGCGGT TCCGGGTGGG GGAAGCGCTT TTGAGCCTCC GCACGGGACC
ACGATCGTGG CGTCGACGTT CAACGGTGGT GTGCTGATCG CGGGTGACCG TAGGGCCACC
ACCGGAAACA CCATCGCCAG CCGCGACCTG GAGAAGGTGT ACGTCACCGA CGCGTACTCG
GCGGTGGGCA TCGCGGGGAC AGCGGGGATC GCCCTCGAGT TGGTGCGGCT CTACACGGTG
GAGCTGGCGC ATTACGAGAA GATCGAGGGC GTTTCCCTGT CGTTGGACGG TAAGGCCAAC
AAGTTGGCGA ACATGGTCAA GGGCAACCTG GACGGGGCCC TTGCCGGTTT GGCGGTGTTG
CCGCTGTTCG TGGGATACGA CATCGACGCG GACGATCCGA AGCGAGCCGG TCGGATCGTG
TCGTTCGACG TGACCGGCGG TCGTTACGAG GAAAACGCCG GGTACCACGC CATCGGGTCG
GGTGCGGTGT ATGCGAAGTC GTCGTTGAAG AAGTTGTACG ACCCGGAGGC TGACGCGGAC
ACGGCGGTGC GAACCGCGAT CGAAGCGTTG TATGACGCGG CCGATGACGA CACCGCGACC
GGTGGTCCGG ACCTCGTGCG CCGTATCTAT CCGACGGTGG TCACGATCAC CGCTGAGCAC
GGTGCCGTGA TGCTGCCCCA GGAAGAGACG GCGTCCATCG CCGAGTCGGT GGTCCGTGAG
CGTTCGGAGC GACCCGGTCA GCTCGGTTGA
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| Protein sequence | MEHTPRNAGF ALPAAYMSTM TSSFIDFLKA EAPDLLPRAR VENMPAVPGG GSAFEPPHGT
TIVASTFNGG VLIAGDRRAT TGNTIASRDL EKVYVTDAYS AVGIAGTAGI ALELVRLYTV
ELAHYEKIEG VSLSLDGKAN KLANMVKGNL DGALAGLAVL PLFVGYDIDA DDPKRAGRIV
SFDVTGGRYE ENAGYHAIGS GAVYAKSSLK KLYDPEADAD TAVRTAIEAL YDAADDDTAT
GGPDLVRRIY PTVVTITAEH GAVMLPQEET ASIAESVVRE RSERPGQLG
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