Gene Svir_22010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22010 
Symbol 
ID8387525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2370645 
End bp2371460 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID644976254 
Productuncharacterized Fe-S protein 
Protein accessionYP_003134036 
Protein GI257056204 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00891318 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATTCGGGTCA CCGGACTGTT CTCCTATCCC GTCAAGGGCT GCGCGGGCGT TGCGCTGCGT 
GAAGACGTTC TGGGACCGGC TGGTTTGAGC CACGACCGTG TGTTCATGGT GGTGGACGAC
GACGGCGAGT TCGTGAGTCA GCGCAACGTC CCACGGCTGG CCGTGGTGCG GCCGGAGATC
GACGACGACG GCACCCGACT GACGCTGACG GCACCCGACG TCGGACCGTT CACCTTGGAG
GTGGACCTCG AGGGTGAACG TCGGGATGTG CGTGTGCACG GCGAACCGTT CCGCGGTGCC
GATCAGGGCG AGCCGGTCGC GGAGTGGTTG TCGACGGTGT TGGGACGATC GTGCCGGTTG
GTGAGGGTGC CGCCGGAGCA CGATCGGGTG ACCAGCGGGG AGACACCGGG CACGGCGGGG
TTCGCCGACA GCAGCGCGGT GCTGCTGATG GCCGAACGCA GTGTGGCGGA GTTGAACGCG
CGGTTGGCCG ACAAAGGCGT CGCGGCGTTG CCGATGGACA GGTTCCGCCC GAATCTCGTG
GTGAACGGCT GGGAGGAGCC GCACGTCGAG GATCGGGTGC GCCGATTCGA GGTGGGACGG
GCGGAGCTCG GGTTCACCAA GCTCGCGGTC CGCTGTGTGG TGACGACGGT CGACCAGCAG
ACCGGCGAGC GCGCGGGTCC GGAACCGTTA CGCACGTTGG CGGAGTATCG ACGTAGTTTC
GGCGGAGTGG CTTTGGGGGT GCGATTCGCG GTGACCCGGC CGGGCGCGGT GGCCGTGGGG
GACGAACTGC GGGTGACCCG CTGGGCCGAG TCCTGA
 
Protein sequence
MRVTGLFSYP VKGCAGVALR EDVLGPAGLS HDRVFMVVDD DGEFVSQRNV PRLAVVRPEI 
DDDGTRLTLT APDVGPFTLE VDLEGERRDV RVHGEPFRGA DQGEPVAEWL STVLGRSCRL
VRVPPEHDRV TSGETPGTAG FADSSAVLLM AERSVAELNA RLADKGVAAL PMDRFRPNLV
VNGWEEPHVE DRVRRFEVGR AELGFTKLAV RCVVTTVDQQ TGERAGPEPL RTLAEYRRSF
GGVALGVRFA VTRPGAVAVG DELRVTRWAE S