Gene Svir_21960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21960 
Symbol 
ID8387520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2365046 
End bp2365369 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content63% 
IMG OID644976249 
Producttwin arginine-targeting protein translocase, TatA/E family 
Protein accessionYP_003134031 
Protein GI257056199 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01411] twin arginine-targeting protein translocase, TatA/E family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.148281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.304965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGT TGCAGCCGTG GCATTTGATC ATTCTGGTTC TTGTCGTGGT CCTGCTGTTC 
GGCGCCAAGC GCCTGCCCGA CGCCGCCAGG TCGATCGGTA AGTCGATGAA GATCTTCCGG
GCCGAGACCA GGGACATGCG GGAATCCGGC CAGACCTCCA GCACCACGGC GACCGAGCCC
GACACCCGTC AACTGCCTGA GTCCACCGCC GCGCAGGCGA CGAACATGAG CACCGAGGAG
AAGGTGGAGC AGTTGCAGCG GCAGCTCGAC GAGCTGAAGC GGCAGCAAGC CGCCCAGCAG
CAAGAGCAGA AGAACGTGAG CTGA
 
Protein sequence
MNALQPWHLI ILVLVVVLLF GAKRLPDAAR SIGKSMKIFR AETRDMRESG QTSSTTATEP 
DTRQLPESTA AQATNMSTEE KVEQLQRQLD ELKRQQAAQQ QEQKNVS