| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21950 |
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| Symbol | |
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| ID | 8387519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2364000 |
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| End bp | 2364965 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976248 |
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| Product | twin arginine targeting protein translocase subunit TatC |
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| Protein accession | YP_003134030 |
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| Protein GI | 257056198 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.288091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.483187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGGACT CCTCGAACAG CCGCGCGAGT ATGCGGCGCA AGCGCAGCCG TCGGCACAAC
CCCGACGGCA CGATGACGCT GATCGAGCAC ATCTACGAGT TTCGCCGGCG CCTGGGTTTC
GCGTTGCTTG CGCTCGTCGC GGGTGGCGTC GTGGGATTCT TGTGGTTCTC CAATCGGGTG
GGACCCATCC CGTCCCTCGG CGAGCTCGTC ACCGGCCCGT ACTGTGCGAT TCCCCCCGAC
AAACGGTTCC CCAGGGACCC ACCGTGCCGG CTGTTGCAGA CCGTGCCGTT CGAAGCGTTC
ATGATCCAAC TGAAGGTGGG TCTGACCGCG GGCGCGGTGT TGTTCGCTCC GGTGTGGCTG
TACCAGCTGT GGGCGTTCAT CGCTCCGGGC CTGTACTCGA AGGAACGCCG CTACGCGCTC
ACGTTCGTGG GCTTCGCGAG CGTGCTGTTC GCACTGGGTG CGGTGCTGGC GTACGCGTTG
GTGCCGTTCG CGCTGGAGAT CCTGGTGAAC TTCGGCGGCG GCGCGTTCGA CACCTGGTTC
ACCGGTGACA AGTACGTCTC GTTCGTGCTG TCCCTGTTGT TGATCTTCGG GGTGAGCTTC
GAGGTTCCCC TGCTGGTCAT CATGCTCAAC CGGGTGGGCG TGGTGAGCTA CGCGCAGCTG
AGTAAGTGGC GTCGTGGACT CATCTTCATC GCGTTCGTGT TCGCGGCGTT CGTGACTCCG
GCCGACCCGT TCTCCATGCT CGCTTTGGCG GGTGCGTTGA CGCTGTTGCT GGAGTTCGCG
TTGCAGATCA CACGCCTGCA TGACCGGAGG AAGGCCCGCA AGCGCGGCGA GGAGGACTGG
GACGAGCTCG CCGATGACGA GCCCGCCCCG TTCGACTACG TGCCGAGCAC GGTCGACGAC
GAATCCCCCC ACGACGGACC CCGCAGTTCG GGTGGGGGCA AGCCGAACAC CGACGACATC
ACATAG
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| Protein sequence | MADSSNSRAS MRRKRSRRHN PDGTMTLIEH IYEFRRRLGF ALLALVAGGV VGFLWFSNRV
GPIPSLGELV TGPYCAIPPD KRFPRDPPCR LLQTVPFEAF MIQLKVGLTA GAVLFAPVWL
YQLWAFIAPG LYSKERRYAL TFVGFASVLF ALGAVLAYAL VPFALEILVN FGGGAFDTWF
TGDKYVSFVL SLLLIFGVSF EVPLLVIMLN RVGVVSYAQL SKWRRGLIFI AFVFAAFVTP
ADPFSMLALA GALTLLLEFA LQITRLHDRR KARKRGEEDW DELADDEPAP FDYVPSTVDD
ESPHDGPRSS GGGKPNTDDI T
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