| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21940 |
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| Symbol | |
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| ID | 8387518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2363082 |
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| End bp | 2363996 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644976247 |
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| Product | conserved protein of unknown function BmrU |
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| Protein accession | YP_003134029 |
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| Protein GI | 257056197 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.400622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.451971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGC GAGTGGCGCT GGCCGTGCAC CCCGGTTCCG GGCAGGGCTC GGCCGCACGA
ATAGCCGGCA CGGTCGCCGA GAGGCTGCGT GCGGAGGTCG ACGAGCTGAC GCTGATCGCC
GCCGACACGC CGCAGCGGTT CCGTGGGTTG GTGGCGGACT GTCGCGCAGC GGGGCTGGAC
GCGCTCGTCG TGCTCGGTGG GGACGGCGCC ATGCACCAAG CCGTGCAGTG CTGCGCCGGA
ACCGAGATGG CGCTGGGACT GGTGCCCGCG GGCACCGGTA ACGACTTCGC CCGGGCTCTG
GGGATCCCCG AACGGCCCGG GGAAGCCGTC GAGACCGTGC TGTCGGCCCT TCGAAGTGGG
CGGCGCCGCG TGGTCGATGT AGGCCGTGCG GATGGCGTCG CCTCGGAGGG GACCCGGTGG
TTCGGCACGG TGTTGTGCAC GGGGTTCGAC GCGGCCGTCA ACGCCCGCGC CAATCGCTTG
CCCTGGCCGT CCGGCCCGCG GCGTTACGAC GTCGCTCTGC TGCGGGAGCT GGTGTCACTG
CGTTCCCGTC CGGTCGTGGT GGACACCGAC GTGGAACGGG TGACCTTGGA GGCCACGTTG
GTGGCGGTGG GCAACACCGC GTTCTACGGC GGTGGTGTGC CGATCTGTCC AGGCGCGCGG
CCGGACGACG GCCTGTTCGA CGTCACGGTG GTGGGGCGCG TGAGCCGACT GCAACTGGCA
CGGATACTGC CCCGTCTCCG TACCGGGGCC CACGTGCGGC ATCCTGCCGT ACACACTCTG
CGCGCCTCGT GGGTGCGCAT CGAACATCAC GTTGCCGGCA CTCCGCGGTG GCCGGTGTTC
GCCGACGGTG ATGCGTTGGG TGCGCTTCCG GTGACGGTGA CGTGTGTGCC GAGGGCCTTG
CACGTTCTCG TCTGA
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| Protein sequence | MGQRVALAVH PGSGQGSAAR IAGTVAERLR AEVDELTLIA ADTPQRFRGL VADCRAAGLD
ALVVLGGDGA MHQAVQCCAG TEMALGLVPA GTGNDFARAL GIPERPGEAV ETVLSALRSG
RRRVVDVGRA DGVASEGTRW FGTVLCTGFD AAVNARANRL PWPSGPRRYD VALLRELVSL
RSRPVVVDTD VERVTLEATL VAVGNTAFYG GGVPICPGAR PDDGLFDVTV VGRVSRLQLA
RILPRLRTGA HVRHPAVHTL RASWVRIEHH VAGTPRWPVF ADGDALGALP VTVTCVPRAL
HVLV
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