Gene Svir_21910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21910 
Symbol 
ID8387515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2358056 
End bp2359249 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content69% 
IMG OID644976244 
Productpredicted acetyltransferase 
Protein accessionYP_003134026 
Protein GI257056194 
COG category[R] General function prediction only 
COG ID[COG4552] Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0891512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.2522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATG TTGTGGTCCG TGCGCTGCGC GACGATGAGT TCCGTGCGGC ACACGCGTTG 
TTCCGCGGTG CTTTGCACCA CGTGCCTCCC ACCGACGAGC AGTGGGAGCG GCTTCGTCCC
GTGTACCAGC CGGGACGGGT GTTCGGAGCC TTCGACGAGC AGCTGATCGG TACGGCCCGG
TCGACGGACG CCGAACTGGT CGTGCCCGGC GGCGCTCGGA TCCCGTTGGC CGCCGTCACA
GGCGTCGGGG TTCGGGTCGA CCGCACCCGT CGCGGTGTGC TGACGGCGTT GATGCGTCGC
CAGCTCACCG ACCTCGTCGA ACGAGGGGTG CCCGCCGCCA TGCTGTACGC CACCGAGGGG
GAGATCTACG GGCGGTTCGG TTACGGCATC GCCACCCGTG CCCGTTCCTG CACCGTGCAC
CGACGGCAGG CACGACTGCG GCCCGAGGCC CCCACCGGAG GGCCGGTCGA ACTGCTCGAC
CTCGACGAGG CCGAACGCCG ACTGCCCGAC GTGTACGCGC GGATTCCGTT GCGACCCGGC
ATGATGACCC GTTCCGAGCG GTGGTGGGCG GGGCTGTTCG CCCGGTTACG CCAGAGCGAT
GAGCCTGTGA CGACACTCGT GCATCACGGC GCGGACGGGC CCGACGGATT CGCGATCTAC
CAGGTGAGCC GGCAATCCGG CCAGCTCGGG ACGCTACGGG TCGTCGACCT GCACACCGCG
GACGCGACCG CGTTCGCGGG ACTGTGGCGT TTCCTGCTCG GCGTGGACCT CGTCGAGACC
ATCGTGGCGT ACCAGCGCTC CTTGGAAGAA CCGCTGGAGC TGCTGTTCAC CGATCCCCGT
GCCTGTGAGA CCACCGAGGT GGGCGACGAG GCGTGGTTGC GCCTGGTGGA CGTCGAGGCC
GCACTGCGGT CGCGGACCTG GCACGGTGAA CCCCTCGTAC TGGAGGTCGT CGATCCCGTG
CTGGAGCACA ACGCCGACCG GTATCAGGTC GGGCCGGCTG GGGTGACGCG CACCGATCAG
CCCGCCGACG CCCGTCTCGC CGTGGACACG TTGGCGATGA TGTTCACCGG GGGGTGGCGG
CCCTCGACTC TGGTGGACGC CGGGCGGATC ACCGTGCGCG ACTTCGAGGT CACTCCGCGT
CTGGACGAAT TGGCCCGCAC GCGGTCGACT CCGTGGTGCG GTACGTTTTT CTGA
 
Protein sequence
MNDVVVRALR DDEFRAAHAL FRGALHHVPP TDEQWERLRP VYQPGRVFGA FDEQLIGTAR 
STDAELVVPG GARIPLAAVT GVGVRVDRTR RGVLTALMRR QLTDLVERGV PAAMLYATEG
EIYGRFGYGI ATRARSCTVH RRQARLRPEA PTGGPVELLD LDEAERRLPD VYARIPLRPG
MMTRSERWWA GLFARLRQSD EPVTTLVHHG ADGPDGFAIY QVSRQSGQLG TLRVVDLHTA
DATAFAGLWR FLLGVDLVET IVAYQRSLEE PLELLFTDPR ACETTEVGDE AWLRLVDVEA
ALRSRTWHGE PLVLEVVDPV LEHNADRYQV GPAGVTRTDQ PADARLAVDT LAMMFTGGWR
PSTLVDAGRI TVRDFEVTPR LDELARTRST PWCGTFF