Gene Svir_21900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21900 
Symbol 
ID8387514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2357617 
End bp2358027 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID644976243 
Producthypothetical protein 
Protein accessionYP_003134025 
Protein GI257056193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.115858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.194824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTGTC CGGCCGTGCG GGTACGCGGT GTGCTGTGGT GGGGAGTCCT ATCCGTCTGT 
GCGGTCCTGA CCCTCGGCTC CTGTGCCGGT GACGAGGCCG AACCGGCCGA ACGAGACGTC
ATCGTCCCCG CCGAGCCCAC AACCAGCTCC TCGACGAGCG CCCAGTCGTC CACATCCTTG
ACGCCGGTGC CGAAGGCGCT CAACGGCGCT GCCGTGGAGA AGTCGGTGCG GGCGGTGCTC
ACCGGCAGCT ACGGCATCAG CGACGTCGAG AAGGTCAGCT GCCCGTTGCG GCCGACCGTG
CGTAAAGGCG CCACTTTCGA CTGCATGGCC ATCATCGAGG GCGAGAACAA ACGCGTACCG
ATCGAGATCG TGGACGACGA CGGTCTCTAC GAGGTCGGCC TGCCGCTCTG A
 
Protein sequence
MECPAVRVRG VLWWGVLSVC AVLTLGSCAG DEAEPAERDV IVPAEPTTSS STSAQSSTSL 
TPVPKALNGA AVEKSVRAVL TGSYGISDVE KVSCPLRPTV RKGATFDCMA IIEGENKRVP
IEIVDDDGLY EVGLPL