| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21800 |
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| Symbol | |
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| ID | 8387504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2345927 |
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| End bp | 2347585 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644976233 |
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| Product | predicted TIM-barrel fold metal-dependent hydrolase |
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| Protein accession | YP_003134015 |
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| Protein GI | 257056183 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.389207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAGCA GCAACACGAC CCTCCTCGTG GGCGGCCGTA TCCACACACC CAGCTCGCCC
GACGCCACCG CCATGGCCGT CACCGACGGC ATCGTCGTCT GGGTCGGCCA GGACGGTCCC
GGCCGTGCGC TGCACCCGGA CGCCGAGGTC ATCGACCTCG ACGGGGCGTT CGTCGCGCCC
GCGTTCGTCG ACGCCCACGT CCACGCCACC AACACCGGAC TGCACCTGAC CGGACTCGAC
CTCACCGAGG TCCGCGACGC CGCCGACCTG CTCGCCGCCG TCCGTGCCGC CGCTGAGGCA
TCCGCCCCCG AAGAAGTGCT GATCGCCCAC GGATGGGACG AGACCACCTG GACCGACTCC
CGCCTGCCCA GTCGAGCCGA ACTCGACGAC GCCGCAGGTG CCGTGCCCGT CTATCTGAGT
CGTGTCGACG CCCATTCCGC GCTCGTCACC AGCGCACTGG TCGAGCTGGC TCCGGACGCC
GTCCACGCCG AGGGCTACTC ACCCGACGGG CCGCTCACCC GCGATGCCCA CCACCTCGTC
CGCACCGCCG CGCACACCGC GATCACCGCC GAACAACGGG AACGGGCGCA ACGCGCCTTC
CTGCGGGCCG CCGCCGCGGC CGGCATCGTC AGCGTCCACG AATGCGCGGG ACCCGTCATC
TCCGGCGAGG AAGACCTGCG GTCCCTGTTG CAGGTCGCGG CCGAACCCGG CCTTCCCGAG
GTCGTGCCCT ACTGGGGAGC GCTCGCCGAC ACCGCCGCCC TCGACCTCGT TCGCGAACTC
GGTCTCCGCG GCCTGGCGGG GGACCTGTTC GTCGACGGCG CCCTCGGTTC CCACACCGCC
GCGCTCTGCG AGCCCTACGC CGATCGACCC CACACCAGCG GCACCCGGTA CCTCGATCGA
CAGGCCATCG CCGACCACCT CGTGGCCTGC ACCGAGGCCG GGATCCAGGC CGGTTTCCAC
GTCATCGGCG ATGCCGCCGT CACCGAGGTC GTGGAGGCGT TCGCCCTGGC GGAGAAGACG
CTGGGACAGC GCGCGCTCGC CCGCCTCGGG CACCGCCTCG AGCACGTCGA GATGATCACC
GCCGAGCAGG CCACGGCCCT GGCGCGATGG AACGTCACCG CCTCCATGCA GCCCGCCTTC
GACGCGGCCT GGGGCGGTGC CCACGGCATG TACGCCACGC GGCTCGGCCC CGACCGCGCC
GCCGCGCTCA ACCCCTTCGC GACCCTCGCC GCCGAGGGCG TACCGCTCGC GTTCGGCTCC
GACACCCCGG TGACACCGCT GGACCCGTGG GGTGGTGTGC GTGCCGCCGT GTACCACCGC
ACACCGGGCT CCGGGATCTC CGCACGCGCC GCCTTCAACG CCCACACCCG GGGCGGGCAC
CGTGCCGCCG GTGTGGTCGA CGGGGTCACG GGCAGCCTCG TCCCCGGTGC CCCCGCCCAC
TACGCCGTGT GGGAGGCCGA CGATCTCGTC GTCGCCACCC CGGATGCCCG CGTGCAGCGG
TGGTCCACCG ACCCCCGCTC CCGTGTCCCC GGGCTCCCGC CGCTCGACCC CGAGGCCACG
CTGCCGCGTT GTCTGCGCAC CGTCCGTGCC GGTCAGGTGA TCTACGACCA CACCGACGGC
ACCGGTCGCG CGGCCCCCGG AACGCAGGCC CGCGCATAG
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| Protein sequence | MSSSNTTLLV GGRIHTPSSP DATAMAVTDG IVVWVGQDGP GRALHPDAEV IDLDGAFVAP
AFVDAHVHAT NTGLHLTGLD LTEVRDAADL LAAVRAAAEA SAPEEVLIAH GWDETTWTDS
RLPSRAELDD AAGAVPVYLS RVDAHSALVT SALVELAPDA VHAEGYSPDG PLTRDAHHLV
RTAAHTAITA EQRERAQRAF LRAAAAAGIV SVHECAGPVI SGEEDLRSLL QVAAEPGLPE
VVPYWGALAD TAALDLVREL GLRGLAGDLF VDGALGSHTA ALCEPYADRP HTSGTRYLDR
QAIADHLVAC TEAGIQAGFH VIGDAAVTEV VEAFALAEKT LGQRALARLG HRLEHVEMIT
AEQATALARW NVTASMQPAF DAAWGGAHGM YATRLGPDRA AALNPFATLA AEGVPLAFGS
DTPVTPLDPW GGVRAAVYHR TPGSGISARA AFNAHTRGGH RAAGVVDGVT GSLVPGAPAH
YAVWEADDLV VATPDARVQR WSTDPRSRVP GLPPLDPEAT LPRCLRTVRA GQVIYDHTDG
TGRAAPGTQA RA
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