Gene Svir_21780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21780 
Symbol 
ID8387502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2343505 
End bp2344290 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID644976231 
Productglycosyl transferase 
Protein accessionYP_003134013 
Protein GI257056181 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.229815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.622988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGG GGACACAGCA CACGGATGAC ATCGACCCGG TGCTGGTGAT CATCCCAACC 
TACAACGAGC GGGACAATCT CCCACCGCTC GTACGTAGGC TGCACACGGT GCTGCCGCAG
GTCCACGTAC TCGTGGTCGA CGACGGCAGC CCTGACGGTA CCGGTGAGGT AGCGGACAAA
CTCGCGGCCG ACGACGACCG CATCCACGTC CTCCACCGCA CGGAGAAGGC CGGACTCGGC
GCCGCTTACA TCGCCGGATT CCGTTGGGCG CTCGAGCGTG ACTACGCCAC CGTGGTCGAG
ATGGACGCGG ACGGCTCCCA CGCGCCCGAG GACCTGCCGC GGGTGCTCGA CGCGCTCAGC
GACGCCGACC TCGTCATCGG CTCCCGGTAT GTGCCCGGCG GTGCGCTCGT CAACTGGCCG
CTGCACCGGC AGCTGCTGTC CCGCATGGCG AATTTGTACT CCAAGATCGC GCTCGGCGTG
CCCGTTTCCG ACATCACGGC CGGATTCCGG GCGTATCGCC GGGGCGTCCT GGAGACCCTG
CCCTTGGGCG CCATCGCCTC GCAGGGCTAT TGCTTCCAGA TCGATCTCAC CTGGCGTACC
GACGAGGAGG GCTTCCGCAT CCTGGAGGTG CCCATCACCT TCACCGAACG GGAGCTCGGC
CAGTCCAAGA TGAGCGGCGC CATCATCGGC GAAGCCCTCG TCAAGGTCGC GCAGTGGGGA
CTGCACCGCC GGACCGAACA AGCGCGTTCC CTGCTCGGGA CCCTGCTGCG GCGAGTACGG
CGCTGA
 
Protein sequence
MAEGTQHTDD IDPVLVIIPT YNERDNLPPL VRRLHTVLPQ VHVLVVDDGS PDGTGEVADK 
LAADDDRIHV LHRTEKAGLG AAYIAGFRWA LERDYATVVE MDADGSHAPE DLPRVLDALS
DADLVIGSRY VPGGALVNWP LHRQLLSRMA NLYSKIALGV PVSDITAGFR AYRRGVLETL
PLGAIASQGY CFQIDLTWRT DEEGFRILEV PITFTERELG QSKMSGAIIG EALVKVAQWG
LHRRTEQARS LLGTLLRRVR R