Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_21780 |
Symbol | |
ID | 8387502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2343505 |
End bp | 2344290 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976231 |
Product | glycosyl transferase |
Protein accession | YP_003134013 |
Protein GI | 257056181 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.229815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.622988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGG GGACACAGCA CACGGATGAC ATCGACCCGG TGCTGGTGAT CATCCCAACC TACAACGAGC GGGACAATCT CCCACCGCTC GTACGTAGGC TGCACACGGT GCTGCCGCAG GTCCACGTAC TCGTGGTCGA CGACGGCAGC CCTGACGGTA CCGGTGAGGT AGCGGACAAA CTCGCGGCCG ACGACGACCG CATCCACGTC CTCCACCGCA CGGAGAAGGC CGGACTCGGC GCCGCTTACA TCGCCGGATT CCGTTGGGCG CTCGAGCGTG ACTACGCCAC CGTGGTCGAG ATGGACGCGG ACGGCTCCCA CGCGCCCGAG GACCTGCCGC GGGTGCTCGA CGCGCTCAGC GACGCCGACC TCGTCATCGG CTCCCGGTAT GTGCCCGGCG GTGCGCTCGT CAACTGGCCG CTGCACCGGC AGCTGCTGTC CCGCATGGCG AATTTGTACT CCAAGATCGC GCTCGGCGTG CCCGTTTCCG ACATCACGGC CGGATTCCGG GCGTATCGCC GGGGCGTCCT GGAGACCCTG CCCTTGGGCG CCATCGCCTC GCAGGGCTAT TGCTTCCAGA TCGATCTCAC CTGGCGTACC GACGAGGAGG GCTTCCGCAT CCTGGAGGTG CCCATCACCT TCACCGAACG GGAGCTCGGC CAGTCCAAGA TGAGCGGCGC CATCATCGGC GAAGCCCTCG TCAAGGTCGC GCAGTGGGGA CTGCACCGCC GGACCGAACA AGCGCGTTCC CTGCTCGGGA CCCTGCTGCG GCGAGTACGG CGCTGA
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Protein sequence | MAEGTQHTDD IDPVLVIIPT YNERDNLPPL VRRLHTVLPQ VHVLVVDDGS PDGTGEVADK LAADDDRIHV LHRTEKAGLG AAYIAGFRWA LERDYATVVE MDADGSHAPE DLPRVLDALS DADLVIGSRY VPGGALVNWP LHRQLLSRMA NLYSKIALGV PVSDITAGFR AYRRGVLETL PLGAIASQGY CFQIDLTWRT DEEGFRILEV PITFTERELG QSKMSGAIIG EALVKVAQWG LHRRTEQARS LLGTLLRRVR R
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